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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4r5oD_

Fold library idPDB HeaderMoleculeTitle
c4r5oD_PDB header: structural genomics, unknown functionChain: D: PDB Molecule: quinonprotein alcohol dehydrogenase-like protein;PDBTitle: crystal structure of a quinonprotein alcohol dehydrogenase-like2 protein (bt1487) from bacteroides thetaiotaomicron vpi-5482 at 2.64 a3 resolution


Added to library: Sat Sep 13 08:15:07 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DCEDLHLGNLAHYPNVLKGTFPTESQVLELGETLEITPELLNPEGATYSWLVNGKEYSTEPTFSYKIDNP
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Known secondary structure (DSSP)





GGGS
SS

B
TTSS
SS

TT



BSS
TT
TT
SSS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence CRADLSCIIKNKYGKVEXSTSFSSNHNFSKGFFYVADGTFNFYDTEKKTAYQDCYASLNAGKTLGIGNYD
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Known secondary structure (DSSP)
TT


TTSTTTTTTS
TTT





TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence SANIIHSNGKFYLLVGTSTSNRDHFYIVDAKTLYYENSAVVGANLSGLTILNEQYGLVTGDGIRRIDLKS
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Known secondary structure (DSSP) TT
S
SSS

TTT




SS


SSSSSTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LNNVRIKNERLLCFYNSIIYNGKVLSNDTYKDESKVKYYDVNELIAAKEGEAPAVTELDIIQKQKINFVL
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TT


STT

SSS


TT




SS



 .........290.........300.........310.........320.........330.........340.........350
Sequence AKDGNVYTLESADNGCNIVKIKNDFTLEKVFANFQPAKGPYHSSPTIGXVASETENIIYLVSTDGAIYKY
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Known secondary structure (DSSP)
TTS
TT
TTS
SS
B


SSTTS





SSSSBTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence ILGDSDSLKAPFIAAESGVSITAPLQLNQQSGELYVTYTEERKDESKIVVYSKDGKVLHTVDCGESVPSQ
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Known secondary structure (DSSP) TTBGGGGSS
SB

BTT
S


TTT

TTTT
TT

TS


 .....
Sequence ILFNN
Predicted secondary structure

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Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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