PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4r39A_

Fold library id	PDB Header	Molecule	Title
c4r39A_	PDB header: transferase	Chain: A: PDB Molecule: blue-light-activated histidine kinase 2;	PDBTitle: histidine kinase domain from erythrobacter litoralis el346 blue-light2 activated histidine kinase

Links to external resources
Added to library: Sat Dec 6 09:25:23 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P D R A T E L D R Q L A E V Q H R V K N H L A M I V S M I R I Q S S Q A G G V G S Q F D S L S R R V E A L Q L L Y Q E M D I A G A A K A T D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
S S
S T T S T
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K I I P L G A Y L G R I A S A I N H I D G R G A I K V N V Q A D T V D V P V E T A G R I G L L V S E V L T N A L Q H A F S D R A S G V V Q L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R S S V M S G E Q L R V T V E D D G R G I P E D C D W P N E G N L G S R I V R Q L V Q G L G A E L N V T R G G T G T I V N I D I P L S Q Q K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
S S
S S
T T T S S S T T
S T T
G G G

. . . . . . .

Sequence T L I A D E R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	D	R	A	T	E	L	D	R	Q	L	A	E	V	Q	H	R	V	K	N	H	L	A	M	I	V	S	M	I	R	I	Q	S	S	Q	A	G	G	V	G	S	Q	F	D	S	L	S	R	R	V	E	A	L	Q	L	L	Y	Q	E	M	D	I	A	G	A	A	K	A	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S													T	T																					S	S		S	T	T	S	T																							T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	I	I	P	L	G	A	Y	L	G	R	I	A	S	A	I	N	H	I	D	G	R	G	A	I	K	V	N	V	Q	A	D	T	V	D	V	P	V	E	T	A	G	R	I	G	L	L	V	S	E	V	L	T	N	A	L	Q	H	A	F	S	D	R	A	S	G	V	V	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	T																																			T	T	T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	S	S	V	M	S	G	E	Q	L	R	V	T	V	E	D	D	G	R	G	I	P	E	D	C	D	W	P	N	E	G	N	L	G	S	R	I	V	R	Q	L	V	Q	G	L	G	A	E	L	N	V	T	R	G	G	T	G	T	I	V	N	I	D	I	P	L	S	Q	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G										S	S				S	S			T	T	T	S	S	S													T	T								S	T	T										G	G	G
	.	.	.	.	.	.	.
Sequence	T	L	I	A	D	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T