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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4r0cB_

Fold library idPDB HeaderMoleculeTitle
c4r0cB_PDB header: membrane proteinChain: B: PDB Molecule: abgt putative transporter family;PDBTitle: crystal structure of the alcanivorax borkumensis ydah transporter2 reveals an unusual topology


Added to library: Sat May 2 08:19:32 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PHPTLLFVWFCLLLLPLTAVLGALDVTATHPLTDETITAHSLLDADGLRYLFTTLVGNFTGFAPLGVVLV
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Known secondary structure (DSSP)

TT

TTT




SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence AMLGLGVAEQSGLLSVSLASLVRLVFTVAFAGVLSSLTVDAGYVVLIPLAGLVFQLAGRPPIAGIATAFA
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Known secondary structure (DSSP) S


GGGSSSTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AVSGGFSANLLVGPVDATLAGLSTEAAHIIDPDRTVAATGNYWFIIASTFLVTGLVTLITRTLTEPRLAH
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Known secondary structure (DSSP) TTTT

SS


TT



GGGGTTTTTTTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence ANTVADASVDAPQIHSRAMKWTGLTLAILLAGLALLVLPNDAPLRHPDTGSVLGSPFIHGLVVIVALIAG
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Known secondary structure (DSSP) SS










TTSSSS
TTS
TTT

STTST
 .........290.........300.........310.........320.........330.........340.........350
Sequence ICGAVYGRVSGQFRNSGAVITAMEVTMASMAGYLVLMFFAAQFVAWFNYSQLGLLLAVKGAAWLGALTVP
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Known secondary structure (DSSP) SSSSSSTTTSTT

 .........360.........370.........380.........390.........400.........410.........420
Sequence KVVLLLLFVVLTALINLMIGSASAKWSILAPVFIPMLMLLGISPEASQAAYRVGDSSTNIITPLMPYFVL
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Known secondary structure (DSSP) TT


TT

GGGG
S
STT
 .........430.........440.........450.........460........
Sequence VLGFARRYQPETGIGTLIALMLPYSLTLLLGWSVLLGVWIGFGWPLGP
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Known secondary structure (DSSP) TTSTT

TT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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