PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4qycA_

Fold library id	PDB Header	Molecule	Title
c4qycA_	PDB header: cell adhesion	Chain: A: PDB Molecule: carcinoembryonic antigen-related cell adhesion molecule 1,	PDBTitle: crystal structure of the chimeric protein human ceacam1: human tim32 membrane distal amino terminal (n)-domain

Links to external resources
Added to library: Sat Nov 15 08:36:23 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T E S M P F N V A E G K E V L L L V H N L P Q Q L F G Y S W Y K G E R V D G N R Q I V G Y A I G T Q Q A T P G P A N S G R E T I Y P N A S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T S B
T T S
S
S S S S S
G G G T T T T
T T
S
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L I Q N V T Q N D T G F Y T L Q V I K S D L V N E E A T G Q F H V Y V G Q N A Y L P C F Y T P A A P G N L V P V C W G K G A C P V F E C G N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G
T T S
B
S S
S
S S
S S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . .

Sequence V V L R T D E R D V N Y W T S R Y W L N G D F R K G D V S L T I E N V T L A D S G I Y C C R I Q I P G I M N D E K F N L K H H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T
S S
S S
S S S
S S
S T T
S T T S
B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	E	S	M	P	F	N	V	A	E	G	K	E	V	L	L	L	V	H	N	L	P	Q	Q	L	F	G	Y	S	W	Y	K	G	E	R	V	D	G	N	R	Q	I	V	G	Y	A	I	G	T	Q	Q	A	T	P	G	P	A	N	S	G	R	E	T	I	Y	P	N	A	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B	T	S	B			T	T	S								S			S	S									S	S	S			G	G	G							T	T	T	T						T	T			S						T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	I	Q	N	V	T	Q	N	D	T	G	F	Y	T	L	Q	V	I	K	S	D	L	V	N	E	E	A	T	G	Q	F	H	V	Y	V	G	Q	N	A	Y	L	P	C	F	Y	T	P	A	A	P	G	N	L	V	P	V	C	W	G	K	G	A	C	P	V	F	E	C	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S			G	G	G											T	T	S										B									S	S									S			S	S									S	S	S			T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Sequence	V	V	L	R	T	D	E	R	D	V	N	Y	W	T	S	R	Y	W	L	N	G	D	F	R	K	G	D	V	S	L	T	I	E	N	V	T	L	A	D	S	G	I	Y	C	C	R	I	Q	I	P	G	I	M	N	D	E	K	F	N	L	K	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T							T	T	T	T						S	S			S	S					S	S	S					S	S			S	T	T		S									T	T	S			B