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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4qtsB_

Fold library idPDB HeaderMoleculeTitle
c4qtsB_PDB header: rna binding proteinChain: B: PDB Molecule: crispr type iii-associated ramp protein csm4;PDBTitle: crystal structure of csm3-csm4 subcomplex in the type iii-a crispr-cas2 interference complex


Added to library: Sat Dec 27 08:21:39 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKMVVLKPKINSKFHFKIFHSNSLFSAIVNNYIKLYGREDLEKNIEKIKNIRLSSLLYKIKNIYLIPKPE
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Known secondary structure (DSSP)

TT




B
TTSTT


BTT


 .........80.........90.........100.........110.........120.........130.........140
Sequence HPEFYPKDIKKIQFFSIKAYKELLDNELDWKNKIKHIVDYQTINKSIVISEKEIEEIKRIFGIKAEKLKH
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Known secondary structure (DSSP)
GGG

GGGGG

TTTTSS
TTT
STTT

TT


S
STT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AKISLISKHLEQKVAKGQLYNIEFIKLNENVEFYFLIDYNNEDKEFIKKLEASIKLIEDEGLGGGFFEKV
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TT




T
S



 .........220.........230.........240.........250.........260.........270.........280
Sequence EIVDLPEDFNEILDENSKYNNLEYKMLLGVGIPNKDDIKNIEYYKLIEIGGYILECLTKPKRNILALTEG
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Known secondary structure (DSSP)


TTSGGGG
SSS
B


TTGGGGB
S






GGGSS




TT
 .........290.........300........
Sequence SIVKNDFIGDVKDKVYTHGKPILLPFNP
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Known secondary structure (DSSP)
S










B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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