Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4qs1e_

Fold library idPDB HeaderMoleculeTitle
c4qs1e_PDB header: ribosomeChain: E: PDB Molecule: 50s ribosomal protein l3;PDBTitle: 70s ribosome translocation intermediate containing elongation factor2 efg/gdp/fusidic acid, mrna, and trnas trapped in the ap/ap pe/e3 chimeric hybrid state. this entry contains the 50s ribosomal subunit4 a. the 30s subunit a can be found in 4qs0. molecule b in the same5 asymmetric unit is deposited as 4qs2 (30s) and 4qs3 (50s)


Added to library: Sat Oct 4 08:19:39 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPAEEKTEFDVILKEAGAKKLEVIKELRAITGLGLKEAK
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)

SSS
SSSSTT
TTTSSSS
SSSSSSS



TT




S
S

S
SSTTTTTTTTT
SSTTTTTTTTTT
 .........80.........90.........100..
Sequence DLAEKGGPVKEGVSKQEAEEIKKKLEAVGAVV
Predicted secondary structure










SS confidence































Known secondary structure (DSSP) TT







SSS

TTTTTSSSSS



S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D