PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4qrkA_

Fold library id	PDB Header	Molecule	Title
c4qrkA_	PDB header: cell adhesion	Chain: A: PDB Molecule: hypothetical protein;	PDBTitle: crystal structure of a hypothetical protein (clospo_03726) from2 clostridium sporogenes atcc 15579 at 1.95 a resolution

Links to external resources
Added to library: Sat Jul 26 08:18:18 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K P K E E I K I V E P N G A E K T K L N L N F G V G K L N I S G N E E K L X K G K F I Y S E N E W K P E I K Y E V K D K D G E L E I S Q P G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S S S S S G G G
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L K S G N V S L N N K R N E W N I N L N E K I P T E I K L S L G T G E F K A D L S K I N L K E L N V G X G V G K V D L D I S G N Y K N N V K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
S S S
T T S
S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V N I E G G V G E A T V Y L P K S I G V K I K A E K G V G A V N A N G F I V E G E N I Y K N S Q Y G K S K N S I E V N I E A G V G A I N I K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S
T T S T T T
T T T T T S S S S

. .

Sequence Q K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	P	K	E	E	I	K	I	V	E	P	N	G	A	E	K	T	K	L	N	L	N	F	G	V	G	K	L	N	I	S	G	N	E	E	K	L	X	K	G	K	F	I	Y	S	E	N	E	W	K	P	E	I	K	Y	E	V	K	D	K	D	G	E	L	E	I	S	Q	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T		S																				S	S	S								S	S	G	G	G										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	K	S	G	N	V	S	L	N	N	K	R	N	E	W	N	I	N	L	N	E	K	I	P	T	E	I	K	L	S	L	G	T	G	E	F	K	A	D	L	S	K	I	N	L	K	E	L	N	V	G	X	G	V	G	K	V	D	L	D	I	S	G	N	Y	K	N	N	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S					T	T											S	S	S																		T	T	S																				S			S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	N	I	E	G	G	V	G	E	A	T	V	Y	L	P	K	S	I	G	V	K	I	K	A	E	K	G	V	G	A	V	N	A	N	G	F	I	V	E	G	E	N	I	Y	K	N	S	Q	Y	G	K	S	K	N	S	I	E	V	N	I	E	A	G	V	G	A	I	N	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	S	S											S					T	T	S				T	T	T					T	T	T	T	T	S	S	S											S
	.	.
Sequence	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)