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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4qrdA_

Fold library idPDB HeaderMoleculeTitle
c4qrdA_PDB header: ligase/ligase inhibitorChain: A: PDB Molecule: methionyl-trna synthetase;PDBTitle: structure of methionyl-trna synthetase in complex with n-(1h-2 benzimidazol-2-ylmethyl)-n'-(2,4-dichlorophenyl)-6-(morpholin-4-yl)-3 1,3,5-triazine-2,4-diamine


Added to library: Sat Aug 1 08:41:03 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AKETFYITTPIYYPSGNLHIGHAYSTVAGDVIARYKRMQGYDVRYLTGTDEHGQKIQEKAQKAGKTEIEY
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Known secondary structure (DSSP)




SS


TT



STTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYSVPDETYYTESQLV
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Known secondary structure (DSSP) TT


STTSTSTTTT
GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence DPQYENGKIIGGKSPDSGHEVELVKEESYFFNISKYTDRLLEFYDQNPDFIQPPSRKNEMINNFIKPGLA
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Known secondary structure (DSSP) TT
TTT

B


GGG
TTSSTTTTTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence DLAVSRTSFNWGVHVPSNPKHVVYVWIDALVNYISALGYLSDDESLFNKYWPADIHLMAKEIVRFHSIIW
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Known secondary structure (DSSP)

SS

SS
TT
TTTTTTSS


S
SGGGT
 .........290.........300.........310.........320.........330.........340.........350
Sequence PILLMALDLPLPKKVFAHGWILMKDGKMSKSKGNVVDPNILIDRYGLDATRYYLMRELPFGSDGVFTPEA
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Known secondary structure (DSSP) TT



S



SS
S

TTTT




S

TTS


 .........360.........370.........380.........390.........400.........410.........420
Sequence FVERTNFDLANDLGNLVNRTISMVNKYFDGELPAYQGPLHELDEEMEAMALETVKSYTESMESLQFSVAL
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Known secondary structure (DSSP) TTTTSTT



S

STTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence STVWKFISRTNKYIDETTPWVLAKDDSQKDMLGNVMAHLVENIRYAAVLLRPFLTHAPKEIFEQLNINNP
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Known secondary structure (DSSP)
TT
GGGTTT
SST


G
 .........500.........510.........
Sequence QFMEFSSLEQYGVLTESIMVTGQPKPIFP
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Known secondary structure (DSSP) GGGSGGGGSSS



S


SS


S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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