Fold library entry viewer: c4qqxA_

Added to library: Sat Aug 23 08:38:03 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	P	L	D	L	R	F	W	A	K	E	R	G	L	R	G	K	T	Y	P	L	V	C	H	S	L	D	A	A	A	A	A	L	V	L	W	N	E	Y	L	S	P	G	L	R	D	T	I	A	S	S	M	E	T	D	E	E	H	A	G	H	C	I	A	F	W	A	G	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T						T	T	S	T	T																							T	S												T	T	S															T	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	I	G	K	L	T	R	E	F	Q	Q	Q	I	A	I	D	L	S	A	Y	P	G	E	E	L	S	G	E	Q	R	S	H	A	A	A	T	G	K	W	L	P	F	A	L	P	S	L	G	Y	P	N	G	G	L	V	T	G	L	V	A	Q	M	L	G	G	H	H	G	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	G		S					T	T	S					T	T								S													G	G	G	T	G	G	G	G	T			T	T												T	T	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	P	H	P	S	F	Q	S	R	N	P	L	A	E	F	G	F	S	S	P	H	W	E	K	Q	R	H	A	L	L	H	A	V	F	D	A	T	G	R	P	T	P	P	D	M	L	D	G	P	T	A	S	V	V	C	G	L	V	I	L	A	D	W	L	V	S	Q	E	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S						T	T																					T	T						S																					T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	L	E	R	L	T	S	L	P	A	D	G	S	A	S	A	L	R	A	H	F	E	T	S	L	R	R	I	P	S	L	L	D	A	A	G	L	R	P	I	T	V	P	P	A	T	F	T	E	S	F	P	H	L	S	K	P	N	G	L	Q	A	S	L	A	K	H	L	P	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T			S	S	S																								T	B															T	T		S	S												S	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	C	T	G	P	G	L	V	L	I	T	A	P	M	G	E	G	K	T	E	A	A	Y	H	V	A	D	L	L	G	K	A	T	G	R	P	G	R	F	L	A	L	P	T	M	A	T	A	D	Q	M	H	T	R	L	K	E	Y	A	R	Y	R	V	E	N	T	D	L	P	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S	S	S									T	T	S																		T									S	S																			S		S	S	S			S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	S	T	L	A	L	L	H	S	M	A	W	L	N	P	D	Y	A	P	A	H	R	D	P	F	A	A	T	D	W	L	M	G	R	K	R	G	L	L	A	P	W	A	V	G	T	I	D	Q	A	L	M	A	V	L	R	A	K	H	N	A	L	R	L	F	G	L	A	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	B						S	T	T	S	T	T		T	T	T	S						T	T				S	G	G	G	S	T	T		G	G	G	S	S											T	T	T	B	S		T	T									T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	V	V	V	D	E	A	H	A	V	D	P	Y	M	Q	V	L	L	E	Q	L	L	R	W	L	G	T	L	D	V	P	V	V	L	L	S	A	T	L	H	H	S	I	A	N	S	L	V	K	A	Y	L	E	G	A	R	G	R	R	W	N	R	S	E	P	Q	P	V	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S		G	G	G																			T	T								S	S																			S	S				S	S	S			S		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	V	S	Y	P	G	W	L	H	V	D	A	R	I	G	K	V	T	R	S	S	D	V	D	P	L	P	I	A	T	T	P	R	K	P	L	E	V	R	L	V	D	V	P	V	K	E	G	A	L	N	R	S	T	V	L	A	K	E	L	T	P	L	V	K	Q	G	G	C	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S							T	T	T						G	G	G	G		S	S										B											T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	I	I	C	T	T	V	A	E	A	Q	G	V	Y	D	L	L	S	Q	W	F	A	T	L	A	P	D	L	Y	L	L	H	S	R	F	P	N	R	Q	R	T	E	I	T	A	T	I	V	D	L	F	G	K	E	G	A	Q	S	G	R	R	P	T	A	V	L	V	A	T	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S													T	G	G	G	G										S		S																	S						T	T										S	G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	V	E	Q	S	L	D	L	D	V	D	L	M	I	S	D	L	A	P	V	S	L	L	L	Q	R	A	G	R	C	W	R	H	E	H	L	G	I	I	N	R	P	Q	W	A	K	Q	P	E	L	V	V	L	T	P	E	Q	N	R	A	P	W	F	P	R	S	W	T	S	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	S	S						B	S																G	G	G	B	S	T	T	T	T	S	S						T	T			S																						T	T	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	P	L	A	L	L	Q	R	T	Y	T	L	L	R	R	R	N	G	A	P	V	Q	I	P	E	D	V	Q	Q	L	V	D	D	V	Y	D	D	D	S	L	A	E	D	L	E	A	D	M	E	R	M	G	E	E	L	A	Q	R	G	L	A	R	N	A	V	I	P	D	P	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	T	T			B		T	T	T	T												G	G	G																									B				G	G	G
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	A	E	D	N	L	N	G	L	T	E	F	S	F	H	V	L	A	T	R	F	G	A	G	S	V	R	V	L	C	Y	Y	V	D	T	A	G	N	R	W	L	D	P	E	C	T	V	E	F	P	E	Q	G	T	G	R	E	G	R	F	T	M	A	D	C	R	D	L	V	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	T	T			T	T	T	T									S	S		S	S												S	S					S	S	T	T	S		S	B			S	S		S	S	G	G	G												T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.
Sequence	T	I	P	V	R	M	G	P	W	A	S	Q	L	T	E	D	N	H	P	P	E	A	W	R	E	S	F	Y	L	R	D	L	V	L	I	P	Q	R	V	T	D	A	V	L	P	T	E	T	G	G	R	E	W	L	L	D	P	C	K	G	L	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	G	G	G	S			T	T	T	S			T	T	G	G	G	S					T								B				B						T	T						B	T	T	T	B

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PDB structure

FASTA sequence

Hidden Markov model

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