PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4qqrB_

Fold library id	PDB Header	Molecule	Title
c4qqrB_	PDB header: oxidoreductase	Chain: B: PDB Molecule: 3,5-epimerase/4-reductase;	PDBTitle: structural insight into nucleotide rhamnose synthase/epimerase-2 reductase from arabidopsis thaliana

Links to external resources
Added to library: Sat Jul 4 08:46:03 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S F N F L I Y G K T G W I G G L L G K L C E A Q G I T Y T Y G S G R L Q D R Q S I V A D I E S V K P S H V F N A A G V W C E S H K V E T I R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T T
S
T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T N V A G T L T L A D I C R E K G L V L I N Y A T G C I F E Y D S G H P L G S G I G F K E E D T P N F T G S F Y S K T K A M V E E L L K N Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T T
B T T B
T T S S
B
T T S
S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E N V C T L R V R M P I S S D L T N P R N F I T K I A R Y E K V V D I P N S M T I L D E L L P I S I E M A K R N L T G I Y N F T N P G V V S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
B
S
T T
T T S T T
S
B
B T T
S
S S
B

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . .

Sequence H N E I L E M Y R D Y I D P S F T W K N F T P R S N N E L D A T K L K T E F P E L M S I K E S L I K F V F E P N K K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
B
T T
T T G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	F	N	F	L	I	Y	G	K	T	G	W	I	G	G	L	L	G	K	L	C	E	A	Q	G	I	T	Y	T	Y	G	S	G	R	L	Q	D	R	Q	S	I	V	A	D	I	E	S	V	K	P	S	H	V	F	N	A	A	G	V	W	C	E	S	H	K	V	E	T	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S													T	T								S		T	T															S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	N	V	A	G	T	L	T	L	A	D	I	C	R	E	K	G	L	V	L	I	N	Y	A	T	G	C	I	F	E	Y	D	S	G	H	P	L	G	S	G	I	G	F	K	E	E	D	T	P	N	F	T	G	S	F	Y	S	K	T	K	A	M	V	E	E	L	L	K	N	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T														T									S	T	T				B	T	T	B		T	T	S	S			B		T	T	S							S														T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	N	V	C	T	L	R	V	R	M	P	I	S	S	D	L	T	N	P	R	N	F	I	T	K	I	A	R	Y	E	K	V	V	D	I	P	N	S	M	T	I	L	D	E	L	L	P	I	S	I	E	M	A	K	R	N	L	T	G	I	Y	N	F	T	N	P	G	V	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T								S		B		S		T	T		T	T	S						T	T		S							B				B														T	T								S		S	S		B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Sequence	H	N	E	I	L	E	M	Y	R	D	Y	I	D	P	S	F	T	W	K	N	F	T	P	R	S	N	N	E	L	D	A	T	K	L	K	T	E	F	P	E	L	M	S	I	K	E	S	L	I	K	F	V	F	E	P	N	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T														B										T	T												T	T	G	G	G