PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4qpvB_

Fold library id	PDB Header	Molecule	Title
c4qpvB_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: uncharacterized protein;	PDBTitle: crystal structure of a hypothetical protein (sav1486) from2 staphylococcus aureus subsp. aureus mu50 at 1.80 a resolution

Links to external resources
Added to library: Sat Aug 23 08:14:27 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S V P E E X E A S K Y V G Q G F Q P P A E K D A I E F S K K H K D K I A K R G E Q F F X D N F G L K V K A T N V V G S G D G V E V F V H C D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T
S S T T
S B
T
B T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D H D I V F N A S I P F D K S I I E S D S S L R S E D K G D D X S T L V G T V L S G F E Y R A H K E E L D N L T E V L K E Y K S K Y K Y T G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G G G
S
S T T T T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y T E N A I X K T Q N S G F R N E Y Y Y L T A I P Y T L D E Y K R Y F Q P L I K E D D K S F R D G X R N S K K Q L K D K S R P Y V V T T L F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S B S B
S S
T G G G T T S
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . .

Sequence S T K D N F T K D N T I D E X I D F S E V L K K K K N I P H D L N V S L Q I S N K Y I N T K R P N Y S K K E V I E V G V F N H E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T
T T S
T T S
S S S S
G G G S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	V	P	E	E	X	E	A	S	K	Y	V	G	Q	G	F	Q	P	P	A	E	K	D	A	I	E	F	S	K	K	H	K	D	K	I	A	K	R	G	E	Q	F	F	X	D	N	F	G	L	K	V	K	A	T	N	V	V	G	S	G	D	G	V	E	V	F	V	H	C	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S				T	T	T		S	S	T	T				S	B											T																													B	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	H	D	I	V	F	N	A	S	I	P	F	D	K	S	I	I	E	S	D	S	S	L	R	S	E	D	K	G	D	D	X	S	T	L	V	G	T	V	L	S	G	F	E	Y	R	A	H	K	E	E	L	D	N	L	T	E	V	L	K	E	Y	K	S	K	Y	K	Y	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T											G	G	G	G	G			S								S																			T														T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	T	E	N	A	I	X	K	T	Q	N	S	G	F	R	N	E	Y	Y	Y	L	T	A	I	P	Y	T	L	D	E	Y	K	R	Y	F	Q	P	L	I	K	E	D	D	K	S	F	R	D	G	X	R	N	S	K	K	Q	L	K	D	K	S	R	P	Y	V	V	T	T	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	B	S	B		S	S																	T	G	G	G	T	T	S																T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Sequence	S	T	K	D	N	F	T	K	D	N	T	I	D	E	X	I	D	F	S	E	V	L	K	K	K	K	N	I	P	H	D	L	N	V	S	L	Q	I	S	N	K	Y	I	N	T	K	R	P	N	Y	S	K	K	E	V	I	E	V	G	V	F	N	H	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T																			T		T	T	S		T	T	S									S				S	S	S			G	G	G	S