Fold library entry viewer: c4qnlA_

Added to library: Sat Jun 27 08:11:39 2015
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	G	I	L	T	N	K	Q	A	I	A	R	H	F	G	V	K	Q	S	E	V	V	Y	F	S	V	G	A	V	L	S	G	Y	K	V	I	Y	D	K	G	T	Q	R	A	Y	S	L	P	A	N	I	G	S	G	V	T	A	I	S	L	S	P	A	G	V	L	V	H	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T			G	G	G						T	T		B		T	T		S					T	T	T	T							T	T			T	T		B						T	T						T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	S	V	D	L	G	A	L	A	V	T	R	K	E	Y	V	T	L	P	D	T	F	T	S	G	S	V	I	Q	T	K	N	E	L	L	T	H	N	G	T	Q	Y	R	W	A	G	G	L	P	K	S	V	P	L	N	S	T	P	V	S	A	G	G	I	S	P	T	A	W	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T									T	T	T						S	T	T						T	T							S	S	S	S					S	S			T	T	T	T	T		B	S	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	A	N	D	E	L	I	R	Q	E	L	N	N	G	L	I	P	P	V	G	S	T	S	V	Y	D	V	P	G	I	V	V	N	T	T	T	D	N	R	A	A	A	Y	A	F	P	G	K	I	F	I	P	N	G	V	T	I	R	C	N	L	L	P	D	D	D	V	R	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T									T	T					T	T				G	G	G	S	T	T				S	S	S	S									S		S						T	T									T	T	S		G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	G	E	G	K	L	I	V	K	N	Q	W	Y	A	K	D	H	T	F	D	I	A	A	S	X	N	G	N	N	K	T	V	N	D	E	I	Y	C	A	F	R	D	Q	T	F	C	R	I	G	I	I	G	D	S	I	T	D	G	A	W	G	K	Q	D	W	S	S	P	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S								S	S	S	S																													T															T	T	T	T	S	T	T						B
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	S	D	G	D	L	D	A	P	S	T	Y	N	H	S	L	S	G	G	S	H	S	W	T	E	H	W	X	N	G	L	L	L	T	Q	S	R	R	S	G	E	T	I	Y	Q	S	A	N	C	S	V	S	G	K	K	L	S	D	G	W	G	Y	R	N	F	D	R	G	F	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	S	B		S	S	B				G	G	G	T	T	T	T	T	S														T	T	T		S	S											T	T			T	T	T	T											T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	N	T	R	Y	G	A	E	A	P	R	V	C	I	L	A	X	G	W	N	D	S	S	A	S	I	A	T	Y	R	D	Q	I	D	K	F	V	R	K	A	W	G	Y	G	C	A	V	G	I	V	T	V	N	D	N	D	S	V	R	X	A	F	E	L	S	T	K	K	Y	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	B	G	G	G	T	S	S			S								S	S		S	S	S																			T	T																						T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	D	K	L	G	V	E	Y	F	N	L	G	P	N	L	T	S	A	S	S	R	N	E	Q	T	G	Y	Y	Y	Y	V	K	K	D	G	T	W	D	T	T	H	P	Q	E	L	G	Q	X	A	X	G	N	A	X	Y	X	Q	T	L	G	N	K	Y	C	R	R	V	R	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T															T	S	S	S	S							B		T	T	S		B		S	S	S																T	T	T					S					T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	X	L	T	Q	A	A	V	E	N	Y	W	D	C	V	G	Y	P	S	G	T	H	Y	A	P	Q	Y	V	P	V	S	G	A	P	A	L	N	V	F	R	F	L	S	K	C	V	T	N	E	N	V	T	X	T	T	X	V	W	C	E	E	E	G	X	T	V	S	L	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	T	T											T	T			B										S	S							S								S	S											S	S	T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	P	W	T	N	A	A	V	V	G	Q	S	H	N	I	R	V	E	S	P	V	G	K	A	L	F	E	S	G	E	Y	Q	E	R	N	T	Q	I	N	A	Y	R	T	V	L	N	G	K	T	A	X	S	Y	F	G	G	G	K	T	L	T	T	Y	X	G	R	L	R	K	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T			T	T									S	S		S	S				S	S	S	T	T																									S	S												S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	N	F	I	R	Y	I	I	D	G	S	P	T	D	A	Y	F	P	X	L	K	F	G	S	Y	K	T	D	G	V	K	L	P	X	V	R	L	S	K	E	P	N	X	T	R	P	A	P	V	X	K	Q	S	N	A	N	D	Y	G	V	F	G	E	V	L	S	G	T	Q	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S			S												T	T	T		B												S	S		S	S				S	S				T	T	T			S	S	S	T	T	B	T	B	S	S	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	K	T	A	D	S	H	L	Y	N	G	A	S	V	G	Y	L	A	V	P	R	G	L	K	K	N	T	Y	I	A	L	N	Y	N	P	L	T	N	V	G	V	L	V	G	V	N	A	A	G	N	X	C	I	G	T	F	N	N	A	N	P	T	D	W	V	V	F	G	D	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B			S			S	S		S	S								T	T				B	T									T	T	T	T									T	T	S									S	S	S		S	S					S		S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	R	E	D	K	G	F	K	V	W	E	Y	T	S	S	S	T	G	A	H	T	F	T	V	E	S	D	D	G	T	A	T	T	S	A	F	S	T	T	V	A	T	S	G	Y	V	G	L	Y	N	P	S	A	S	S	Q	L	F	T	L	E	Y	S	X	T	I	G	N	V	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T											T	T	T										T	T	S	S									S	S	S		S									S	S	S														S	S
	.	.	.	.	.	.	.
Sequence	E	H	H	H	H	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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