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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4qniA_

Fold library idPDB HeaderMoleculeTitle
c4qniA_PDB header: structural genomics, unknown functionChain: A: PDB Molecule: uncharacterized protein;PDBTitle: crystal structure of a hypothetical protein (bt3507) from bacteroides2 thetaiotaomicron vpi-5482 at 2.30 a resolution


Added to library: Sat Aug 16 08:18:16 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YEHYISFSSQLDSKGVTNIYVPYSRHDAEGNYAEGGEGRSNYQLPILVSGPSNVTVHVAHDADTLNILNY
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Known secondary structure (DSSP)






S

STTS
SS
B
TT

BSSSSTT






 .........80.........90.........100.........110.........120.........130.........140
Sequence ARYATRTELYYEDXGAEGLAYASYPESLQIKAGENKGLLDLKFDFRNIDXSEKWVLPLQIVDDASYNYVA
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Known secondary structure (DSSP) TT
GGGSTTSTT

S

S
TT
S
TT

TTS


SSSSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence HPRKDYAKAILRIFPFNDYSGDYSGTGITNKVVTGYDGDGKPIETAESITKSSIRGYVIDEQTIFTYAGI
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Known secondary structure (DSSP)
SSTTTS
TT

TT
TTS

SS



STTSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VDEDYTDRRKYKIKFAFNGETNGSVTISCDNAEEIGFELNKDVTPSFRISSSXDDAKPYLEHRYVIINNV
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Known secondary structure (DSSP)

TT
TTGGGGSSS
TTTTTTT


SS


SS
TT
 .........290.........300.........310.........320.
Sequence DYYFNYIPVEGTIIRYHVKGTLTLSRDINTQIPDEDQAIEW
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Known secondary structure (DSSP)
SSTT

TTSSSSSSSB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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