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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4qmkB_

Fold library idPDB HeaderMoleculeTitle
c4qmkB_PDB header: toxinChain: B: PDB Molecule: type iii secretion system effector protein exou;PDBTitle: crystal structure of type iii effector protein exou (exou)


Added to library: Sat Dec 20 08:21:50 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AKVPLVKGVGERNLSIYRHSDGRVEVVVSPPPPAHLVLSGGGAKGIAFPGMVQALEEADKLKGVKVVSGS
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Known secondary structure (DSSP)

TTTT
TTS





S

SGGGGGTT
STT

 .........80.........90.........100.........110.........120.........130.........140
Sequence SAGAICAALLASGMDAKAFTQLSNNLDLPRLLNDPVTAWLQEASSELGKLVRSLPGPVGNISQLLLTLLP
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Known secondary structure (DSSP) GGGTT

TT



T
SS

S
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence RQPLEDLIRNESRQSILAHIAGMRPPEVTAIAERLSAGGGATFRDLEVLSRHIPAIKQLNITGTGMFDGR
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Known secondary structure (DSSP)

T


T


B
TTS
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence PQLVVFNANLTPDMDIGRAALISGALPGLFSFPESPLGKDEALIVKFEQNDRLQAFSEQTVTLPLNSDTM
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Known secondary structure (DSSP) STTTSTTSBSGGG


TT
TT





TT






 .........290.........300.........310.........320.........330.........340.........350
Sequence TPEQKQHLQAQARQTVSGHLQQRELERERHEFPSLNDAVMAMDDQMLASVQVDLQNDAAGAEALRFRKDA
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Known secondary structure (DSSP)


SSTS
TS
 .........360.........370.........380.........390.........400.........410.........420
Sequence QQALQALDTAIAEANQTSTSLVITPKLASALRNLDALARRPEDIEWLGKRLNAPGQRNFQQLLQVGTKQG
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Known secondary structure (DSSP) TT
SS




SSTT
TT


 .........430.........440.........450.........460.........470.........480.........490
Sequence LSKVLTSAVAEMQKRDIGVKAENFIREVIYPSLYRPGQPAANVELLQRAVRDLGEATTPAEFNRVLDGIV
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Known secondary structure (DSSP)

TTSTT

T

S
 .........500.........
Sequence KHYRASTTVEQAKAWRIPV
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Known secondary structure (DSSP)



TS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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