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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4qlbD_

Fold library idPDB HeaderMoleculeTitle
c4qlbD_PDB header: transferaseChain: D: PDB Molecule: probable glycogen [starch] synthase;PDBTitle: structural basis for the recruitment of glycogen synthase by2 glycogenin


Added to library: Sat Jul 12 08:22:05 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MPRNLSSNKIAKTIAGEDLDEEEVLEMDAGQSAREEGRFVFECAWEVANKVGGIYTVLRSKAQISTEELG
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Known secondary structure (DSSP)
BS


TT



GGGB



TTT
TTTTS

SSG
 .........80.........90.........100.........110.........120.........130.........140
Sequence DQYCMFGPMKDGKWRLEVDPIEPENRTIRAAMKRFQADGFRCMYGRWLIEGYPKVILFDLGSGAVKMNEW
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Known secondary structure (DSSP) GG

TT
GGGT





GGGT

SSTT


GGGGSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence KHELFEQCKIGIPHEDIESNDAVILGFMVALFLKHFRESVTSYTPLVVAHFHEWQAGVGLLMTRLWKLDI
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Known secondary structure (DSSP)




SS


SS

TGGGTT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence ATVYTTHATLLGRHLDLYNNLDSFDLDAEAGKRKIYHQYCLERAACQTAHIFTTVSEITGLEAEHFLCRK
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Known secondary structure (DSSP) SS



TTSTTS

TTT

SS
TS

 .........290.........300.........310.........320.........330.........340.........350
Sequence PDVLTPNGLNVVKFAALHEFQNLHAQNKEKINQFIRGHFHGHLDFDLDKTLYFFTAGRYEFSNKGGDMFI
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Known secondary structure (DSSP)
S



B
GGGT

TTTTTT


S
GGGSSS
TTTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ESLARLNHYLKTTSDPRHMGVTVVAFLIYPAPASFNVESLKGQAVTKQLKEAVDRIKEKVGQRIFDICLQ
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Known secondary structure (DSSP) S


TTTTT






B
TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence GHLPEPEELMSPADNILLKRCIMSLHNSLPPICTHNMIRADDPVLESLRRTSLFNKPEDRVKVVFHPEFL
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Known secondary structure (DSSP) T



GGGSS
T





SBSB

S
SS
TT
S

SS
S
S

 .........500.........510.........520.........530.........540.........550.........560
Sequence SSVSPLIGLDYEDFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSVSTNLSGFGCFMQEHVEDHEQKGIYV
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Known secondary structure (DSSP)
TT
SSS



S


SSBSS
TT

TTB
TTGGGGT
 .........570.........580.........590.........600.........610.........620.........630
Sequence IDRRHKAAEESVQELAQVMYDFCGQSRRQRIILRNSNEGLSALLDWQNLGVFYRDCRRLALERLHPDVDK
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Known secondary structure (DSSP)

SSS
T

GGGGGBT
S
 .........640.........650.
Sequence IMRDNEGKVPSAATSRRPSIH
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Known secondary structure (DSSP) TTTTS




SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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