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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
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| Fold library id | PDB Header | Molecule | Title | 
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| c4qiwF_ | PDB header: transcription | Chain: F: PDB Molecule: dna-directed rna polymerase, subunit f; | PDBTitle: crystal structure of euryarchaeal rna polymerase from thermococcus2 kodakarensis | 
| Added to library: Sat Oct 11 08:28:33 2014 | |
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| Links to external resources | |
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|   | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | 
| Sequence | M | I | G | R | K | K | L | E | E | H | Y | I | T | I | A | E | A | K | E | L | L | E | R | R | H | A | E | G | L | A | E | N | P | E | E | P | M | F | Y | E | A | R | V | S | L | E | H | A | E | R | F | A | K | L | K | P | E | Q | A | R | E | L | K | E | K | L | M | G | L | F | 
| Predicted secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | ||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | 
| Sequence | D | W | I | N | E | R | I | A | A | K | L | V | D | I | L | P | E | D | Y | L | D | I | R | V | I | F | A | K | E | E | Y | M | P | T | P | E | E | A | E | E | I | I | K | V | I | D | E | Y | R | P | L | E | ||||||||||||||||||
| Predicted secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | |||||||||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | T | T |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  | T | S | S | 
| Download: | PDB structure | FASTA sequence | 
| 
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