Fold library entry viewer: c4qiwA_

Added to library: Sat Oct 11 08:45:47 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	V	I	G	S	I	E	F	G	I	L	S	P	Q	E	I	R	K	M	S	A	A	E	I	T	V	P	D	T	Y	D	D	D	G	Y	P	I	E	G	G	L	M	D	K	R	L	G	V	I	D	P	G	L	R	C	E	T	C	G	A	R	A	G	E	C	P	G	H	F	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S		S	S	B									S	S	S					S	S	S	S	S	S	S	S				S	S					S	S	S				S	S	S						B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	I	E	L	A	R	P	V	I	H	V	G	F	A	K	T	I	H	R	V	L	E	S	T	C	R	E	C	G	R	I	K	L	T	D	E	E	I	E	E	Y	M	Q	K	F	E	V	M	G	D	R	K	G	A	V	D	K	L	I	K	E	I	H	K	K	A	K	E	R	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B										G	G	G									T	T	S		T	T	T				S												T	T	S	T	T	T	T																		T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	C	P	H	C	G	A	P	Q	F	P	I	K	F	E	R	P	T	I	Y	W	E	L	R	K	D	E	E	G	N	E	Y	K	H	R	M	M	P	S	E	V	R	D	R	L	E	K	I	P	D	K	D	L	P	L	L	G	L	H	P	E	K	S	R	P	E	W	M	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	S											S	S								S	S	S	S																	S	S	S		T	T	T	G	G	G	T	T			S	S	S			G	G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	V	L	P	V	P	P	V	T	M	R	P	S	I	T	L	R	A	E	D	D	L	T	H	K	L	V	D	I	I	R	I	N	N	R	L	K	S	N	I	E	A	G	A	P	Q	L	I	I	E	D	L	W	D	L	L	Q	Y	H	V	T	T	Y	I	N	N	E	T	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B			T	T	T	S			B				B																								S				S																				T	T		S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	P	P	A	K	H	K	S	G	R	P	L	K	T	L	A	Q	R	L	K	G	F	S	A	R	T	V	I	S	P	D	P	M	I	S	I	N	E	V	G	V	P	L	A	V	A	M	E	L	T	V	P	E	K	V	T	E	F	N	Y	E	K	L	K	Q	R	V	L	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S				B		T	T	S		B				G	G	G	T	S													T	T	S		T	T												S								T	T	T										T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	P	E	K	Y	P	G	A	N	Y	V	I	D	P	E	G	R	R	I	R	L	M	E	S	N	R	E	L	I	A	E	K	L	D	I	G	W	T	V	E	R	H	L	E	D	G	D	V	V	L	F	N	R	Q	P	S	L	H	R	M	S	I	M	A	H	R	V	R	V	M	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S	S	S	S								T	T						S	S	S	S						T	S	S			T	T									T	T								S	S			S	G	G	G										S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Y	R	T	F	R	L	N	L	P	V	C	P	P	Y	N	A	D	F	D	G	D	E	M	N	L	H	V	P	Q	T	E	E	A	Q	A	E	A	K	I	L	M	E	V	Q	N	H	I	I	S	P	R	Y	G	G	P	L	I	A	G	I	Q	D	H	I	S	G	G	Y	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S					G	G	G					T			S	S	S										S											S	B	G	G	G	G	S			T	T	T	T			S	S	S			S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	R	E	G	A	Y	F	T	R	Y	E	V	E	Q	M	L	M	F	A	G	M	D	V	N	E	L	P	E	P	D	K	Y	E	N	G	E	P	L	W	S	G	K	T	I	F	S	L	L	L	P	D	D	L	T	I	W	Y	R	N	K	L	C	D	E	P	E	R	C	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		T	T												G	G	G	T				T	T	T	T	T				S	B		S	S	S	S	B								T	T	T	S		T	T								T	T			G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	E	K	L	I	R	K	L	A	Y	D	G	F	V	Y	I	Q	N	G	K	L	L	S	G	A	V	D	K	K	A	Y	G	R	E	D	G	K	L	L	D	I	I	V	R	E	Y	G	V	E	R	A	R	Q	F	L	D	Q	V	T	K	L	T	I	W	V	I	T	H	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S					T	T								S	T	T	T	S	S	S	S			S	S								S	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	F	T	T	A	I	D	D	E	D	L	P	Q	E	A	I	D	R	I	H	E	I	I	R	E	A	E	E	K	V	Q	R	L	I	E	A	Y	K	R	G	E	L	E	P	L	P	G	K	T	L	E	E	T	L	E	S	K	I	M	A	V	L	A	E	A	R	D	N	A	G	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	G	G	G																														T	T						S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	V	A	E	R	Y	L	G	M	N	N	H	A	V	I	M	A	K	T	G	A	R	G	K	I	L	N	I	T	Q	M	A	A	M	L	G	Q	Q	S	I	R	G	K	R	L	Y	R	G	Y	R	G	R	V	L	T	H	F	K	P	G	D	L	G	A	R	A	R	G	F	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	S		T	T	S									T	S	S										T	T						B	S	S	S	S	B	S			S	B	T	T	B	S	S	T	T	S		T	T			S	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	N	S	Y	K	S	G	L	T	P	Q	E	Y	F	F	H	A	M	G	G	R	E	G	L	V	D	T	A	V	R	T	A	Q	S	G	Y	M	Q	R	R	L	I	N	A	L	Q	D	L	K	V	D	Y	D	G	T	V	R	D	P	T	G	I	I	V	Q	F	K	Y	G	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		T	T	T																																								T	T					T	T	S					T	T	T					S	S	T	T	T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.
Sequence	G	V	D	P	M	K	S	W	Q	G	K	T	V	D	V	D	R	V	I	V	R	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S	S	B	T	T	B	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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