Fold library entry viewer: c4qi7A_

Added to library: Sat Jul 18 08:46:02 2015
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	A	P	K	T	F	T	H	P	D	T	G	I	V	F	N	T	W	S	A	S	D	S	Q	T	K	G	G	F	T	V	G	M	A	L	P	S	N	A	L	T	T	D	A	T	E	F	I	G	Y	L	E	C	S	S	A	K	N	G	A	N	S	G	W	C	G	V	S	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T											T	T	T		S	S								B		T	T	T	T	T	S			S												S	S		S	S								S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	A	M	T	N	N	L	L	I	T	A	W	P	S	D	G	E	V	Y	T	N	L	M	F	A	T	G	Y	A	M	P	K	N	Y	A	G	D	A	K	I	T	Q	I	A	S	S	V	N	A	T	H	F	T	L	V	F	R	C	Q	N	C	L	S	W	D	Q	D	G	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	B	S	S									T	T									B	S	S	S	S							S	S												S	S										T		S					T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	G	I	S	T	S	N	K	G	A	Q	L	G	W	V	Q	A	F	P	S	P	G	N	P	T	C	P	T	Q	I	T	L	S	Q	H	D	N	G	M	G	Q	W	G	A	A	F	D	S	N	I	A	N	P	S	Y	T	A	W	A	A	K	A	T	K	T	V	T	G	T	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	T	B									S	S			B	S	T	T		G	G	G		B						S								B			G	G	G	B		T	T					G	G	G	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	G	P	V	T	T	S	I	A	A	T	P	V	P	T	G	V	S	F	D	Y	I	V	V	G	G	G	A	G	G	I	P	V	A	D	K	L	S	E	S	G	K	S	V	L	L	I	E	K	G	F	A	S	T	G	E	H	G	G	T	L	K	P	E	W	L	N	N	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T			B	S							S	T	T										T	T	S	S							S	S				S	T	T	T	T						G	G	G	T	T	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	T	R	F	D	V	P	G	L	C	N	Q	I	W	K	D	S	D	G	I	A	C	S	D	T	D	Q	M	A	G	C	V	L	G	G	G	T	A	I	N	A	G	L	W	Y	K	P	Y	T	K	D	W	D	Y	L	F	P	S	G	W	K	G	S	D	I	A	G	A	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T		G	G	G	T	T	G	G	G	T			T	T	T	B		S	S	B	S	S			B		S	T	T	T					S			B													S		T	T	S	S	T	T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	A	L	S	R	I	P	G	T	T	T	P	S	Q	D	G	K	R	Y	L	Q	Q	G	F	E	V	L	A	N	G	L	K	A	S	G	W	K	E	V	D	S	L	K	D	S	E	Q	K	N	R	T	F	S	H	T	S	Y	M	Y	I	N	G	E	R	G	G	P	L	A	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									B	S			S	T	T	S			S	S	T												T	T	T						T	T	T						S	S							B			B	T	T	B							T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Y	L	V	S	A	K	K	R	S	N	F	K	L	W	L	N	T	A	V	K	R	V	I	R	E	G	G	H	I	T	G	V	E	V	E	A	F	R	N	G	G	Y	S	G	I	I	P	V	T	N	T	T	G	R	V	V	L	S	A	G	T	F	G	S	A	K	I	L	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S	S	S						S										T	T										S	S	S	S								B	S	T	T	T							S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	S	G	I	G	P	K	D	Q	L	E	V	V	K	A	S	A	D	G	P	T	M	V	S	N	S	S	W	I	D	L	P	V	G	H	N	L	V	D	H	T	N	T	D	T	V	I	Q	H	N	N	V	T	F	Y	D	F	Y	K	A	W	D	N	P	N	T	T	D	M	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	B	S										T	S	T	T	G	G	G	S			T	T	S		B				T	T				B												T	T							S	S	T	T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Y	L	N	G	R	S	G	I	F	A	Q	A	A	P	N	I	G	P	L	F	W	E	E	I	T	G	A	D	G	I	V	R	Q	L	H	W	T	A	R	V	E	G	S	F	E	T	P	D	G	Y	A	M	T	M	S	Q	Y	L	G	R	G	A	T	S	R	G	R	M	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S		S	G	G	G	S		S	S													T	T	S											S				T	T			S	S	S										T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	S	P	T	L	N	T	V	V	S	D	L	P	Y	L	K	D	P	N	D	K	A	A	V	V	Q	G	I	V	N	L	Q	K	A	L	A	N	V	K	G	L	T	W	A	Y	P	S	A	N	Q	T	A	A	D	F	V	D	K	Q	P	V	T	Y	Q	S	R	R	S	N	H	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T										S	S		S																		S	S	S		T	T						T	T	T	T	S									S			S					B		S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	M	G	T	N	K	M	G	T	D	D	G	R	S	G	G	T	A	V	V	D	T	N	T	R	V	Y	G	T	D	N	L	Y	V	V	D	A	S	I	F	P	G	V	P	T	T	N	P	T	A	Y	I	V	V	A	A	E	H	A	A	A	K	I	L	A	Q	P	A	N	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		T	T		B		S	S	B	G	G	G	T		S	B	S	B		T	T	S	B	B	T	T		S	S					S	G	G	G		S	S			S	S		T																		S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.
Sequence	V	P	K	W	G	W	C	G	G	P	T	Y	T	G	S	Q	T	C	Q	A	P	Y	K	C	E	K	Q	N	D	W	Y	W	Q	C	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		T	T						T	T			S				B		T	T							S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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