Fold library entry viewer: c4qi6A_

Added to library: Sat Jul 18 08:32:08 2015
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	N	V	P	N	T	F	T	D	P	D	S	G	I	T	F	N	T	W	G	L	D	E	D	S	P	Q	T	Q	G	G	F	T	F	G	V	A	L	P	S	D	A	L	T	T	D	A	S	E	F	I	G	Y	L	K	C	A	R	N	D	E	S	G	W	C	G	I	S	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S							T	T	T	T										S	S	S	S	S		T	T								B		S	S	T	T	T	S			S	S										B	T	T	B							S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	P	M	T	N	S	L	L	I	T	A	W	P	H	E	D	T	V	Y	T	S	L	R	F	A	T	G	Y	A	M	P	D	V	Y	E	G	D	A	E	I	T	Q	V	S	S	S	V	N	S	T	H	F	S	L	I	F	R	C	K	N	C	L	Q	W	S	H	G	G	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	T	T	S									T	T										S	S	S	S							S	S												S	S										S		S	S				T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	G	A	S	T	S	G	G	V	L	V	L	G	W	V	Q	A	F	D	D	P	G	N	P	T	C	P	E	Q	I	T	L	Q	Q	H	D	N	G	M	G	I	W	G	A	Q	L	N	T	D	A	A	S	P	S	Y	T	D	W	A	A	Q	A	T	K	T	V	T	G	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S	S										S	S			S		T	T	S	S	S	S																			T	T	T	B		T	T						T	T			B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	V	G	V	P	V	P	T	G	V	S	F	D	Y	I	V	V	G	G	G	A	G	G	I	P	A	A	D	K	L	S	E	A	G	K	S	V	L	L	I	E	K	G	F	A	S	T	A	N	T	G	G	T	L	G	P	E	W	L	E	G	H	D	L	T	R	F	D	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B			S	S			B	S							S	T	T											T	T								S	S				S	G	G	G	T						G	G	G	T	T	T	T			T	T	T		G
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	L	C	N	Q	I	W	V	D	S	K	G	I	A	C	E	D	T	D	Q	M	A	G	C	V	L	G	G	G	T	A	V	N	A	G	L	W	F	K	P	Y	S	L	D	W	D	Y	L	F	P	D	G	W	K	Y	N	D	V	Q	P	A	I	N	R	A	L	S	R	I	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T	T							T	T	T	B		S	S	B	S	S			B		S	T	T	T					S			B													S		T	T	S	S															S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	T	D	A	P	S	T	D	G	K	R	Y	Y	Q	E	G	F	E	V	L	S	K	G	L	A	A	G	G	W	T	S	V	T	A	N	N	A	P	D	K	K	N	R	T	F	A	H	A	P	F	M	F	A	G	G	E	R	N	G	P	L	G	T	Y	F	Q	T	A	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	S			S	T	T	S																	T	T	T						T	T	T		T	T			S	S							B	S		B	T	T	B			G	G	G	T	T							T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	N	N	F	D	V	W	L	N	T	S	V	K	R	V	I	R	E	G	G	H	I	T	G	V	E	V	E	P	F	R	D	G	G	Y	E	G	I	V	P	V	T	K	V	T	G	R	V	I	L	S	A	G	T	F	G	S	A	K	I	L	L	R	S	G	I	G	P	E	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S						S										T	T										S	S	T	T			B					B	S	T	T	T							S												T	T	B	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Q	L	E	V	V	A	A	S	E	K	D	G	P	T	M	I	G	N	S	S	W	I	N	L	P	V	G	Y	N	L	D	D	H	L	N	T	D	T	V	I	S	H	P	D	V	V	F	Y	D	F	Y	E	A	W	D	D	P	I	E	S	D	K	N	S	Y	L	E	S	R	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		S	S	S	T	T	T				G	G	G		B				T	T		S	B	B												T	T						S	S					S													S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	I	L	A	Q	A	A	P	N	I	G	P	M	F	W	E	E	I	V	G	A	D	G	I	V	R	Q	L	Q	W	T	A	R	V	E	G	S	L	G	A	P	N	G	H	T	M	T	M	S	Q	Y	L	G	R	G	A	T	S	R	G	R	M	T	I	T	P	S	L	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	G	G	G	S		S	S													T	T	S											S	S			S	S			S	S	S										T	T					B						T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	I	V	S	D	V	P	Y	L	K	D	P	N	D	K	E	A	V	I	Q	G	I	I	N	L	Q	N	A	L	Q	N	V	A	N	L	T	W	L	F	P	N	S	T	I	T	P	R	E	Y	V	E	S	M	V	V	S	P	S	N	R	R	S	N	H	W	M	G	T	N	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T		S																			T	T	S	S	S						S		T	T	S								T	S								B		S			B		S	S		B
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	G	T	D	D	G	R	K	G	G	S	A	V	V	D	L	D	T	R	V	Y	G	T	D	N	L	F	V	I	D	A	S	I	F	P	G	V	P	T	T	N	P	T	S	Y	I	V	V	A	A	E	H	A	S	S	R	I	L	A	L	P	D	L	E	P	V	P	K	Y	G	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S		G	G	G	T		S		S	B		T	T	S	B	B	T	T		S	S					S	G	G	G		S	S			S	S		T																		S						B		T	T	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.
Sequence	C	G	G	R	E	W	T	G	S	F	V	C	A	D	G	S	T	C	E	Y	Q	N	E	W	Y	S	Q	C	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S			S				B		T	T								T	T

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PDB structure

FASTA sequence

Hidden Markov model

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