Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4qi4A_

Fold library idPDB HeaderMoleculeTitle
c4qi4A_PDB header: oxidoreductaseChain: A: PDB Molecule: cellobiose dehydrogenase;PDBTitle: dehydrogenase domain of myricoccum thermophilum cellobiose2 dehydrogenase, mtdh


Added to library: Sat Jul 18 08:33:06 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PVPTGVSFDYIVVGGGAGGIPAADKLSEAGKSVLLIEKGFASTANTGGTLGPEWLEGHDLTRFDVPGLCN
Predicted secondary structure










































SS confidence





































































Known secondary structure (DSSP)


TT

BS

STTTTT


SS


SGGGT




GGGTTTT

TTT
GGGTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence QIWVDSKGIACEDTDQMAGCVLGGGTAVNAGLWFKPYSLDWDYLFPDGWKYNDVQPAINRALSRIPGTDA
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)

TTTB
SSBSS

B
STTTS

B




S
TTSSS

BS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PSTDGKRYYQEGFEVLSKGLAAGGWTSVTANNAPDKKNRTFAHAPFMFAGGERNGPLGTYFQTAKKRNNF
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP)
STTS

SSTTT


TTTSTT

SS


B

BTTB

TT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence DVWLNTSVKRVIREGGHITGVEVEPFRDGGYEGIVPVTKVTGRVILSAGTFGSAKILLRSGIGPEDQLEV
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)
STTSSTTS

BSTTT

S
TTTTTBS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VAASEKDGPTMIGNSSWINLPVGYNLDDHLNTDTVISHPDVVFYDFYEAWDDPIESDKNSYLESRTGILA
Predicted secondary structure

















































SS confidence





































































Known secondary structure (DSSP)
TTTTTTS

GGG
B


TT
SBB




TT




STS

TTTTTS
SGGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence QAAPNIGPMFWEEIVGADGIVRQLQWTARVEGSLGAPNGHTMTMSQYLGRGATSRGRMTITPSLTTIVSD
Predicted secondary structure









































SS confidence





































































Known secondary structure (DSSP) S
SS

TTS
SS

SS

SSS
TT



B
TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence VPYLKDPNDKEAVIQGIINLQNALQNVANLTWLFPNSTITPREYVESMVVSPSNRRSNHWMGTNKLGTDD
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)

TT
SSSSTT
TBTTS
TS

S

S

B
TT
B
SSB
 .........500.........510.........520.........530.........540.........550.........560
Sequence GRKGGSAVVDLDTRVYGTDNLFVIDASIFPGVPTTNPTSYIVVAAEHASSRILALPDLEPVPKYGQCGGR
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP) GGGT
SBSB
TT
BBTT
SS
SGGG
SS

SS
TS




B
TTS
T
 .........570.........580.....
Sequence EWTGSFVCADGSTCEYQNEWYSQCL
Predicted secondary structure










SS confidence
























Known secondary structure (DSSP) T

S


B
TT

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D