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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4qfrA_

Fold library idPDB HeaderMoleculeTitle
c4qfrA_PDB header: signaling protein/inhibitor/activatorChain: A: PDB Molecule: 5'-amp-activated protein kinase catalytic subunit alpha-1;PDBTitle: structure of ampk in complex with cl-a769662 activator and2 staurosporine inhibitor


Added to library: Sat Aug 9 10:01:51 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK
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Known secondary structure (DSSP)


TT
TTTS
TTT

TT



TTB

 .........80.........90.........100.........110.........120.........130.........140
Sequence LYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLD
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Known secondary structure (DSSP)
SS

TTS
S

TT




GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence AHMNAKIADFGLSNMMSDGEFLRSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV
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Known secondary structure (DSSP) TT



TTS


TT

B


S
TTT

TT

B
SSS
SS

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFKWHLGIRSQSRP
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Known secondary structure (DSSP) TT




TTS
S
SSGGGS

TSTT

SS




SSB


S
 .........290.........300.........310.........320.........330.........340.........350
Sequence NDIMAEVCRAIKQLDYEWKVVNPYYLRVRRKNPVTSTFSKMSLQLYQVDSRTYLLDFRSIDDSHTIEFFE
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Known secondary structure (DSSP) GGGT

STT
SSS


SSS



 .........360.
Sequence MCANLIKILAQ
Predicted secondary structure

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Known secondary structure (DSSP) TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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