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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4qbdC_

Fold library idPDB HeaderMoleculeTitle
c4qbdC_PDB header: motor proteinChain: C: PDB Molecule: myosin heavy chain, muscle;PDBTitle: the first x-ray crystal structure of an insect muscle myosin.2 drosophila melanogaster, skeletal muscle myosin ii, an embryonic3 isoform, subfragment-1


Added to library: Sat Jun 14 08:29:55 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EDEDPTPYLFVSLEQRRIDQSKPYDSKKSCWIPDEKEGYLLGEIKATKGDIVSVGLQGGEVRDIKSEKVE
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Known secondary structure (DSSP)

S

GGGT


TTS


TTTTTTTTTTS
GGG
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence KVNPPKFEKIEDMADMTVLNTPCVLHNLRQRYYAKLIYTYSGLFCVAINPYKRYPVYTNRCAKMYRGKRR
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GGGTT
SBGGG
SS
STT

TT

SS

S
SSTTT

G
 .........150.........160.........170.........180.........190.........200.........210
Sequence NEVPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYFATVGASKKTDEAAKSKGSLEDQ
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Known secondary structure (DSSP) GGS







TTS
T
SS

SSSSTTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence VVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHFGPTGKLAGADIETYLLEKARVISQQSLERSYHIFYQI
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Known secondary structure (DSSP) TT

SS
TTSS
TTS



GGGGT


TT

SB
 .........290.........300.........310.........320.........330.........340.........350
Sequence MSGSVPGVKDICLLTDNIYDYHIVSQGKVTVASIDDAEEFSLTDQAFDILGFTKQEKEDVYRITAAVMHM
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Known secondary structure (DSSP) T

STTTT

S
GGG
GGG
SS
S

TT

TT

 .........360.........370.........380.........390.........400.........410.........420
Sequence GGMKFKQRGREEQAEQDGEEEGGRVSKLFGCDTAELYKNLLKPRIKVGNEFVTQGRNVQQVTNSIGALCK
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Known secondary structure (DSSP) TT



TT

S
S
ST

S
TT



 .........430.........440.........450.........460.........470.........480.........490
Sequence GVFDRLFKWLVKKCNETLDTQQKRQHFIGVLDIAGFEIFEYNGFEQLCINFTNEKLQQFFNHHMFVLEQE
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SS

 .........500.........510.........520.........530.........540.........550.........560
Sequence EYKREGIDWAFIDFGMDLLACIDLIEKPMGILSILEEESMFPKATDQTFSEKLTNTHLGKSAPFQKPKPP
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Known secondary structure (DSSP) TT






TTSTTSTT
TT

TTTSTT




 .........570.........580.........590.........600.........610.........620.........630
Sequence KPGQQAAHFAIAHYAGCVSYNITGWLEKNKDPLNDTVVDQFKKSQNKLLIEIFADHAGQATVSSAYKEQL
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Known secondary structure (DSSP)
TT



STT

TTTB



TTSS
TTT




B
 .........640.........650.........660.........670.........680.........690.........700
Sequence NSLMTTLRSTQPHFVRCIIPNEMKQPGVVDAHLVMHQLTCNGVLEGIRICRKGFPNRMMYPDFKMRYQIL
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Known secondary structure (DSSP) TS


TT

TT


SSTTS

GGG
 .........710.........720.........730.........740.........750.........760.........770
Sequence NPKGIKGIEDPKKCTKVLIESTELNDDQYRLGNTKVFFRAGVLGQMEEFRDERLGKIMSWMQAWARGYLS
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Known secondary structure (DSSP)
TTTTTT


TT

GGG
SS
TT
 ........
Sequence RKGFKKLQ
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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