PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4q9aA_

Fold library id	PDB Header	Molecule	Title
c4q9aA_	PDB header: hydrolase	Chain: A: PDB Molecule: tat pathway signal sequence domain protein;	PDBTitle: crystal structure of a putative gdsl-like lipase (parmer_00689) from2 parabacteroides merdae atcc 43184 at 2.86 a resolution

Links to external resources
Added to library: Sat Jun 28 08:21:34 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A P K I N L K K D C V I L F Q G D I T D C G R D R N S N R C N T X E Q F G S G Y V L F T A T Q L L E G K A A L Q P K I Y N R G I S G N K V Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S T T
T T
S S S S
S S T G G G
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q L R E R W E I D C L A F Q P D V L S I L I G V N D Y W H T L T H G Y K G T V E T Y E N D L R A L L K Y T K E K L P N T Q I V L C E P F T L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T T T G G G
S
S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R D G A A I E D S K W Y P X F D E F R K S A R K L S E E F N T I F V P F Q S G F D A A V K L A P A R Y W S N D G V H P D L P G R Q L X A N X

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S T T
T T T T T T
T T T S
S S S S S

. . . . . . . .

Sequence W X E A T G L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	P	K	I	N	L	K	K	D	C	V	I	L	F	Q	G	D	I	T	D	C	G	R	D	R	N	S	N	R	C	N	T	X	E	Q	F	G	S	G	Y	V	L	F	T	A	T	Q	L	L	E	G	K	A	A	L	Q	P	K	I	Y	N	R	G	I	S	G	N	K	V	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T											S	T	T			T	T			S	S	S	S						S	S													T	G	G	G										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	L	R	E	R	W	E	I	D	C	L	A	F	Q	P	D	V	L	S	I	L	I	G	V	N	D	Y	W	H	T	L	T	H	G	Y	K	G	T	V	E	T	Y	E	N	D	L	R	A	L	L	K	Y	T	K	E	K	L	P	N	T	Q	I	V	L	C	E	P	F	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T	T	T	T	T	G	G	G			S								S									S																									T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	D	G	A	A	I	E	D	S	K	W	Y	P	X	F	D	E	F	R	K	S	A	R	K	L	S	E	E	F	N	T	I	F	V	P	F	Q	S	G	F	D	A	A	V	K	L	A	P	A	R	Y	W	S	N	D	G	V	H	P	D	L	P	G	R	Q	L	X	A	N	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S	T	T							T	T	T	T														T	T														T	T	T	S							S	S	S	S	S
	.	.	.	.	.	.	.	.
Sequence	W	X	E	A	T	G	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T