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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4q6qA_

Fold library idPDB HeaderMoleculeTitle
c4q6qA_PDB header: hydrolaseChain: A: PDB Molecule: conserved hypothetical secreted protein;PDBTitle: structural analysis of the zn-form ii of helicobacter pylori csd4, a2 d,l-carboxypeptidase


Added to library: Sat Nov 8 08:19:53 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MIEKAPTNVEDRDKAPHLLLLAGIQGDEPGGFNATNLFLMHYSVLKGLVEVVPVLNKPSMLRNHRGLYGD
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Known secondary structure (DSSP)


SSGGGGGGS


SSTT

SSS
TTTT
S
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence MNRKFAALDKNDPEYPTIQEIKSLIAKPSIDAVLHLHDGGGYYRPVYVDAMLNPKRWGNCFIIDQDEVKG
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Known secondary structure (DSSP) GGG
SSS

TTSTT
TT

SS
SS

BTTTT

TTSSS

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AKFPNLLAFANNTIESINAHLLHPIEEYHLKNTRTAQGDTEMQKALTFYAINQKKSAFANEASKELPLAS
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Known secondary structure (DSSP) SSS

TT
SSGGG



GGGT
TTGGGSTT
TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RVFYHLQAIEGLLNQLNIPFKRDFDLNPNSVHALINDKNLWAKISSLPKMPLFNLRPKLNHFPLPHNTKI
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Known secondary structure (DSSP) T

SS

ST
TT
TTS

STTB
STT

G
 .........290.........300.........310.........320.........330.........340.........350
Sequence PQIPIESNAYIVGLVKNKQEVFLKYGNKLMTRLSPFYIEFDPSLEEVKMQIDNKDQMVKIGSVVEVKESF
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Known secondary structure (DSSP) GGS
SSSSTTTT




TTTT
SS
 .........360.........370.........380.........390.........400.........410.......
Sequence YIHAMDNIRANVIGFSVSNENKPNEAGYTIKFKDFQKRFSLDKQERIYRIEFYKNNAFSGMILVKFV
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Known secondary structure (DSSP)


SS
TT

SS

SS


TT
GGGS
GGG
SBTTS
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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