PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4q6jB_

Fold library id	PDB Header	Molecule	Title
c4q6jB_	PDB header: unknown function	Chain: B: PDB Molecule: lmo0131 protein;	PDBTitle: crystal structure of eal domain protein from listeria monocytogenes2 egd-e

Links to external resources
Added to library: Sat May 10 10:14:03 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A X D I S S T E I W D A I R R N S Y L L Y Y Q P K V D A K T N K I I G F E G L V R L K T A T T I L A P I D F F D D I V L L N A T R E X Q D F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
T T T
S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V A E T A I K Q I N Q L G G R F S I S I N I P A H Y V A S S T Y X T F L H D Y V K E H L K Y P E C L E I E I I E R T E L A I A D K N L R K I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T S S T
S
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K D L G V K V S X D D F G K G Y S S L A Y L R S L P I D I V K T D X S F I A L L K T D R K Q Q I I I R A I V N L C H D L G G K V V T E G V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
S S T T T S T T S
S
G G G G S S G G G
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . .

Sequence D X E Q V E K L R E X K V D Y F Q G Y Y F S R P L P X E E I K Q K Y S I V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
S T T T
B
T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	X	D	I	S	S	T	E	I	W	D	A	I	R	R	N	S	Y	L	L	Y	Y	Q	P	K	V	D	A	K	T	N	K	I	I	G	F	E	G	L	V	R	L	K	T	A	T	T	I	L	A	P	I	D	F	F	D	D	I	V	L	L	N	A	T	R	E	X	Q	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S											T	T												T	T	T															S	S															T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	A	E	T	A	I	K	Q	I	N	Q	L	G	G	R	F	S	I	S	I	N	I	P	A	H	Y	V	A	S	S	T	Y	X	T	F	L	H	D	Y	V	K	E	H	L	K	Y	P	E	C	L	E	I	E	I	I	E	R	T	E	L	A	I	A	D	K	N	L	R	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	T	S	S												T																	S		G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	D	L	G	V	K	V	S	X	D	D	F	G	K	G	Y	S	S	L	A	Y	L	R	S	L	P	I	D	I	V	K	T	D	X	S	F	I	A	L	L	K	T	D	R	K	Q	Q	I	I	I	R	A	I	V	N	L	C	H	D	L	G	G	K	V	V	T	E	G	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T						S	S	T	T	T	S	T	T								S			S						G	G	G	G	S	S	G	G	G																		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Sequence	D	X	E	Q	V	E	K	L	R	E	X	K	V	D	Y	F	Q	G	Y	Y	F	S	R	P	L	P	X	E	E	I	K	Q	K	Y	S	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S										T	T						S	T	T	T				B										T	T