Fold library entry viewer: c4q5vA_

Added to library: Sat Nov 29 08:22:52 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	Q	V	F	H	F	Y	W	L	D	A	Y	E	D	Q	Y	N	Q	P	G	V	V	F	L	F	G	K	V	W	I	E	S	A	E	T	H	V	S	C	C	V	M	V	K	N	I	E	R	T	L	Y	F	L	P	R	E	M	K	I	D	L	N	T	G	K	E	T	G	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	T	S	T	T											G	G	G	T																						S					T	T	T		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	S	M	K	D	V	Y	E	E	F	D	E	K	I	A	T	K	Y	K	I	M	K	F	K	S	K	P	V	E	K	N	Y	A	F	E	I	P	D	V	P	E	K	S	E	Y	L	E	V	K	Y	S	A	E	M	P	Q	L	P	Q	D	L	K	G	E	T	F	S	H	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T						T															S	S		T	T			S											T	T	S					T	T				S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	T	N	T	S	S	L	E	L	F	L	M	N	R	K	I	K	G	P	C	W	L	E	V	K	S	P	Q	L	L	N	Q	P	V	S	W	C	K	A	E	A	M	A	L	K	P	D	L	V	N	V	I	K	D	V	S	P	P	P	L	V	V	M	A	F	S	M	K	T	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T											T	T			S	S							S		B			S	S			B	S	S	S						S	S	G	G	G						S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	N	A	K	N	H	Q	N	E	I	I	A	M	A	A	L	V	H	H	S	F	A	L	D	K	A	A	P	K	P	P	F	Q	S	H	F	C	V	V	S	K	P	K	D	C	I	F	P	Y	A	F	K	E	V	I	E	K	K	N	V	K	V	E	V	A	A	T	E	R	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S																		S	S	S				S	S	S		S										S	S					T	T									T							S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	L	G	F	F	L	A	K	V	H	K	I	D	P	D	I	I	V	G	H	N	I	Y	G	F	E	L	E	V	L	L	Q	R	I	N	V	C	K	A	P	H	W	S	K	I	G	R	L	K	R	S	N	M	P	K	L	G	F	G	E	R	N	A	T	C	G	R	M	I	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S					S	S	T	T	T	T												T	T		S		G	G	G	G	S	S	B			S	S												T	T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	D	V	E	I	S	A	K	E	L	I	R	C	K	S	Y	H	L	S	E	L	V	Q	Q	I	L	K	T	E	R	V	V	I	P	M	E	N	I	Q	N	M	Y	S	E	S	S	Q	L	L	Y	L	L	E	H	T	W	K	D	A	K	F	I	L	Q	I	M	C	E	L	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S			S																									T	S	S																									T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	P	L	A	L	Q	I	T	N	I	A	G	N	I	M	S	R	T	L	M	G	G	R	S	E	R	N	E	F	L	L	L	H	A	F	Y	E	N	N	Y	I	V	P	D	K	Q	I	R	K	K	A	A	Y	A	G	G	L	V	L	D	P	K	V	G	F	Y	D	K	F	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	S						T	T																		T	T	B													S					B										S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	L	L	L	D	F	N	S	L	Y	P	S	I	I	Q	E	F	N	I	C	F	T	T	V	Q	R	V	E	Q	I	P	E	L	P	D	P	S	L	E	M	G	I	L	P	R	E	I	R	K	L	V	E	R	R	K	Q	V	K	Q	L	M	K	Q	Q	D	L	N	P	D	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S									T	T			T	T	T	S												T	T	S																								T		S	S			T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	Q	Y	D	I	R	Q	K	A	L	K	L	T	A	N	S	M	Y	G	C	L	G	F	S	Y	S	R	F	Y	A	K	P	L	A	A	L	V	T	Y	K	G	R	E	I	L	M	H	T	K	E	M	V	Q	K	M	N	L	E	V	I	Y	G	D	T	D	S	I	M	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T		T	T		T	T																										T	T	T							B	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	T	N	S	T	N	L	E	E	V	F	K	L	G	N	K	V	K	S	E	V	N	K	L	Y	K	L	L	E	I	D	I	D	G	V	F	K	S	L	L	L	L	K	K	K	K	Y	A	A	L	V	V	E	P	T	S	D	G	N	Y	V	T	K	Q	E	L	K	G	L	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	S		S	S																	T	T											S	T	T										S	S	G	G
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	V	R	R	D	W	C	D	L	A	K	D	T	G	N	F	V	I	G	Q	I	L	S	D	Q	S	R	D	T	I	V	E	N	I	Q	K	R	L	I	E	I	G	E	N	V	L	N	G	S	V	P	V	S	Q	F	E	I	N	K	A	L	T	K	D	P	Q	D	Y	P	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G		S	S	S																	S	S	S																							T		S		T	T	T	T							S	S		G	G	G		S	S	G
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	K	S	L	P	H	V	H	V	A	L	W	I	N	S	Q	G	G	R	K	V	K	A	G	D	T	V	S	Y	V	I	C	Q	D	G	S	N	L	T	A	S	Q	R	A	Y	A	P	E	Q	L	Q	K	Q	D	N	L	T	I	D	T	Q	Y	Y	L	A	Q	Q	I	H	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G														S	S	S				T	T								B			S	S				G	G	G												S	S			B									T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.
Sequence	V	A	R	I	C	E	P	I	D	G	I	D	A	V	L	I	A	T	W	L	G	L	D	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T		T	T										T	T

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PDB structure

FASTA sequence

Hidden Markov model

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