PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4q3kB_

Fold library id	PDB Header	Molecule	Title
c4q3kB_	PDB header: hydrolase	Chain: B: PDB Molecule: mgs-m1;	PDBTitle: crystal structure of mgs-m1, an alpha/beta hydrolase enzyme from a2 medee basin deep-sea metagenome library

Links to external resources
Added to library: Sat Feb 28 08:46:13 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence F Q G M N I S K I T I N Q H V G V T L T C Y V Q D V S Q E M S N M S K R P A M L I F P G G G Y Q F C S D R E A E P I A L S Y L A K G Y N A F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
T T
G G G G G G S S
S T T T
G G G S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V L R Y S V K E H A V F P R P L I D A E D A L S Y L K D N A H A L H I N P D K I A V I G F S A G G H L A T T L A T E G K V R P N A V V L G Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T T T T
S S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P A L I R H E K Y W N F P T P K V D Q Q T P E M F V F H T F E D D L V P L S H P L Y I V E E L S K A N I P V E F H L F K S G V H G L S L G N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
B T T T B
S
T T
T T
S S S
T T T
S S
S
T T
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . .

Sequence K I V S N G L D K M I E D D V Q V W F D L S C R W L D K V L D L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T T T
G G G
T T T T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	Q	G	M	N	I	S	K	I	T	I	N	Q	H	V	G	V	T	L	T	C	Y	V	Q	D	V	S	Q	E	M	S	N	M	S	K	R	P	A	M	L	I	F	P	G	G	G	Y	Q	F	C	S	D	R	E	A	E	P	I	A	L	S	Y	L	A	K	G	Y	N	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S									S	S		T	T												G	G	G	G	G	G	S	S										S	T	T	T				G	G	G	S										T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	L	R	Y	S	V	K	E	H	A	V	F	P	R	P	L	I	D	A	E	D	A	L	S	Y	L	K	D	N	A	H	A	L	H	I	N	P	D	K	I	A	V	I	G	F	S	A	G	G	H	L	A	T	T	L	A	T	E	G	K	V	R	P	N	A	V	V	L	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							G	G	G			T	T																T					T												T														S	S			S						S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	A	L	I	R	H	E	K	Y	W	N	F	P	T	P	K	V	D	Q	Q	T	P	E	M	F	V	F	H	T	F	E	D	D	L	V	P	L	S	H	P	L	Y	I	V	E	E	L	S	K	A	N	I	P	V	E	F	H	L	F	K	S	G	V	H	G	L	S	L	G	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		B	T	T	T	B		S							T	T										T	T		S	S	S		T													T	T									S	S			S			T	T		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Sequence	K	I	V	S	N	G	L	D	K	M	I	E	D	D	V	Q	V	W	F	D	L	S	C	R	W	L	D	K	V	L	D	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	T	T	T		G	G	G			T	T	T	T	T													T	T