Fold library entry viewer: c4q35A_

Added to library: Sat Jun 28 08:25:15 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	D	L	A	S	Q	C	M	L	G	V	P	S	Y	D	R	P	L	V	Q	G	D	T	N	D	L	P	V	T	I	N	A	D	H	A	K	G	D	Y	P	D	D	A	V	F	T	G	S	V	D	I	M	Q	G	N	S	R	L	Q	A	D	E	V	Q	L	H	Q	K	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S					S					S		S	S	S								S				S		T	T	T						S	S						T	T						S									S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	G	Q	P	V	R	T	V	D	A	L	G	N	V	H	Y	D	D	N	Q	V	I	L	K	G	P	K	G	W	A	N	L	N	T	K	D	T	N	V	W	E	G	D	Y	Q	M	V	G	R	Q	G	R	G	K	A	D	L	M	K	Q	R	G	E	N	R	Y	T	I	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S										S	S						S	S						S						T	T	T													S	S	S													T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	G	S	F	T	S	C	L	P	G	S	D	T	W	S	V	V	G	S	E	I	I	H	D	R	E	E	Q	V	A	E	I	W	N	A	R	F	K	V	G	P	V	P	I	F	Y	S	P	Y	L	Q	L	P	V	G	D	K	R	R	S	G	F	L	I	P	N	A	K	Y	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					B				T	T			S												T	T	T	T												T	T															T	T		S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	T	N	Y	F	E	F	Y	L	P	Y	Y	W	N	I	A	P	N	M	D	A	T	I	T	P	H	Y	M	H	R	R	G	N	I	M	W	E	N	E	F	R	Y	L	S	Q	A	G	A	G	L	M	E	L	D	Y	L	P	S	D	K	V	Y	E	D	E	H	P	N	D	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T														T	T											G	G	G	T													T	T											S										T	T		S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	S	R	R	W	L	F	Y	W	N	H	S	G	V	M	D	Q	V	W	R	F	N	V	D	Y	T	K	V	S	D	P	S	Y	F	N	D	F	D	N	K	Y	G	S	S	T	D	G	Y	A	T	Q	K	F	S	V	G	Y	A	V	Q	N	F	N	A	T	V	S	T	K	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	T											S	S	T	T					S			S	S	S		T	T		S													T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	F	Q	V	F	S	E	Q	N	T	S	S	Y	S	A	E	P	Q	L	D	V	N	Y	Y	Q	N	D	V	G	P	F	D	T	R	I	Y	G	Q	A	V	H	F	V	N	T	R	D	D	M	P	E	A	T	R	V	H	L	E	P	T	I	N	L	P	L	S	N	N	W	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S																				S	T	T															S	S	S	S	S																			S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	N	T	E	A	K	F	L	A	T	H	Y	Q	Q	T	N	L	D	W	Y	N	S	R	N	T	T	K	L	D	E	S	V	N	R	V	M	P	Q	F	K	V	D	G	K	M	V	F	E	R	D	M	E	M	L	A	P	G	Y	T	Q	T	L	E	P	R	A	Q	Y	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							S		S	S				S																						T	T	T	S	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	V	P	Y	R	D	Q	S	D	I	Y	N	Y	D	S	S	L	L	Q	S	D	Y	S	G	L	F	R	D	R	T	Y	G	G	L	D	R	I	A	S	A	N	Q	V	T	T	G	V	T	S	R	I	Y	D	D	A	A	V	E	R	F	N	I	S	V	G	Q	I	Y	Y	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S			S	S			B									T		S		S	B	S	S	S	S																			T	T															S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	E	S	R	T	G	D	D	N	I	T	W	E	N	D	D	K	T	G	S	L	V	W	A	G	D	T	Y	W	R	I	S	E	R	W	G	L	R	G	G	I	Q	Y	D	T	R	L	D	N	V	A	T	S	N	S	S	I	E	Y	R	R	D	E	D	R	L	V	Q	L	N	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S							S	S				S														S	S	S											G	G	G	T															T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	H	Y	A	S	P	E	Y	I	Q	A	T	L	P	K	Y	Y	S	T	A	E	Q	Y	K	N	G	I	S	Q	V	G	A	V	A	S	R	P	I	A	D	R	W	S	I	V	G	A	Y	Y	Y	D	T	N	A	N	K	Q	A	D	S	M	L	G	V	Q	Y	S	S	C	C	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S							S	T	T	T	T	T														T	T	T											T	T	T	T														S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.
Sequence	A	I	R	V	G	Y	E	R	K	L	N	G	W	D	N	D	K	Q	H	A	V	Y	D	N	A	I	G	F	N	I	E	L	R	G	L	S	S	N	Y	G	L	G	T	Q	E	M	L	R	S	N	I	L	P	Y	Q	N	T	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	T	T																S	S	S	S					S						T	S	S	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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