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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4q2dA_

Fold library idPDB HeaderMoleculeTitle
c4q2dA_PDB header: hydrolaseChain: A: PDB Molecule: crispr-associated helicase cas3;PDBTitle: crystal structure of crispr-associated protein in complex with 2'-2 deoxyadenosine 5'-triphosphate


Added to library: Sat Nov 22 08:41:57 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AGSPVGAAGWRVDPWIFWAKWGSGPDLGWHPLLCHXLDVAAVTLQXWRRVLPAAWKARISGVLGVGQEDA
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Known secondary structure (DSSP)

S




GGG


SS


TS
TS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ERWLAFFAGGHDIGKASPAFQLQLRPEQGRELVARRLRDAGLPLFNARAPHGTISANVLETVLADVFGLS
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Known secondary structure (DSSP) GGGGGGSSTTS
GGGTT








TT


 .........150.........160.........170.........180.........190.........200.........210
Sequence GRSARWVAFAVGGHHGFVPSYDEVRRDLDQQAVGWGXWDAAREVLLCRLADALGLPGSSRPTVESTPDAF
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Known secondary structure (DSSP) TTTSS


TS



TT
TTS






 .........220.........230.........240.........250.........260.........270.........280
Sequence XLAGLVSVADWIGSNEEYFPYAAQSALQVPQLDAEAYLERAXRQAERAXASLGWVGWRPASGSXRLTELF
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Known secondary structure (DSSP) T
TTTS

SBS
TT





TT
TT









 .........290.........300.........310.........320.........330.........340.........350
Sequence PYIRQPTTVQAAAEELAGEVKSPSITIIEAPXGEGKTEAAXLLADTFSTAHGXSGCYFALPTXATSNQXF
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Known secondary structure (DSSP) TT
SS

TT

SS


TTS
SS



TT

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence GRVTDYLRHRYPEDVVVVNLVHGHSDLSALLQELRQKGEEIFQLQGVYDEALGDEQLGAVVAGQWFTRGK
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Known secondary structure (DSSP) TTTS
TTSB
SSTTT
S







TTSSSGGGTSGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence RALLPPYGVGTVDQALLAVLQVKHVFVRLFALSTKTVIVDEVHAYDVYXTTLLHRLLEWLGALSVPVVVL
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Known secondary structure (DSSP) GGGSSSTGGGBS
TTTS




STT

 .........500.........510.........520.........530.........540.........550.........560
Sequence SATLPSARRRELVKAYARGAGWQAERDLPPAGYPRITYAAAEDVRGIHFAPSEASRRKVALRWVSAPEHE
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Known secondary structure (DSSP) S


T










SS
SS




GGG


GGGGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence ALGQLLAEALSQGGCAAIICNTVPRAQALYSALREVFPGLAEDGXPELDLLHARYPYEEREVREARTLGR
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Known secondary structure (DSSP) GSTT

SSTTT


B
TTSSBS
S
S
 .........640.........650.........660.........670.........680.........690.........700
Sequence FSRNGRRPHRAILVATQVIEQSLDLDFDLXVTDLAPVDLVLQRXGRLHRHPVHDPLRPERLRSPELWVVS
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Known secondary structure (DSSP) STTS


S
TTTTSS



BS


TTBT

GGGSTTS
GGGSS

 .........710.........720.........730.........740.........750.........760.........770
Sequence PQVXGDVPIFDRGSASVYDEHTLLRSWLALRDRDTLQLPEDIEELVEQVYSDGRVPQGASEELRSLWERT
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Known secondary structure (DSSP)
TT

S
TT
STTSSS



TT

 .........780.........790.........800.........810.........820.........830.........840
Sequence FKAQQKVLREDSLQAKYRYIKGPGYNSIWGIVTASVEEDAPELHPALQALTRLAEPSVSAVCLVAGSGGP
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Known secondary structure (DSSP) TGGGTB


TT


STTSS
SSTTSS


STTTTTSS




TTS
 .........850.........860.........870.........880.........890.........900.........910
Sequence CLPDGTPVDLDTPPDAAXAERLLRRSVAITDARVLDPLLDVPVPKGWERSSLLRGYRPLVFDASGRAXVG
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Known secondary structure (DSSP) B
TTS
B

TTS


TT

S


T
TTTTT
TTST
 .........920.......
Sequence RWIVRIDPELGIVVESP
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Known secondary structure (DSSP) TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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