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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4q1vA_

Fold library idPDB HeaderMoleculeTitle
c4q1vA_PDB header: hydrolaseChain: A: PDB Molecule: putative dipeptidyl aminopeptidase iv;PDBTitle: crystal structure of a putative dipeptidyl aminopeptidase iv2 (bacova_01349) from bacteroides ovatus atcc 8483 at 2.48 a resolution


Added to library: Sat May 10 08:41:41 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TKKPTLEELIPGGESYLYAENLYGLQWWGDECIKPGVDTLYSIQPKTGKETXVITREQINKVLEENKAGK
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Known secondary structure (DSSP)




STT
TT






TT
TT
SS
TTT

TT


 .........80.........90.........100.........110.........120.........130.........140
Sequence LSHLYSVRFPWTDKAQXLFTIAGKFIVYNFKNNQVVSTFKPKDGANNEDYCAASGNVAYTIDNNLYVNEK
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Known secondary structure (DSSP)
S
STT
B


SSS
TTTTTT


TT
TTTTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence AVTNEPEGIVCGQTVHRNEFGINKGTFWSPKGNLLAFYRXDESXVTQYPLVDITARVGEVNNVRYPXAGX
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Known secondary structure (DSSP) S



TTSS

GGG
TT


S
TTSS

TTS
TTSSS


BTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TSHQVKVGIYNPATGKSIYLNAGDPTDRYFTNISWAPDEKSLYLIEVNRDQNHAKLCQYNAETGEPXGVL
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Known secondary structure (DSSP)


TTTT





TT
TTSSTTSSTTT

 .........290.........300.........310.........320.........330.........340.........350
Sequence YEEXHPKYVEPQNPIVFLPWDPTKFIYQSQRDGYNHLYLFETNAANXKGETYNSANGGSYFQAGKVKQLT
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Known secondary structure (DSSP)
SS




S

TT
TTSS
GGGGGS

TTS
S



 .........360.........370.........380.........390.........400.........410.........420
Sequence KGNWLVSEILGFNTKRKEVIFTAVEGLRSGHFAVNVSNGKISQPFENCKESEHSGTLSASGTYLIDRYST
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Known secondary structure (DSSP)
SSSTTTTTTTTT

BSS
GGG

B

TTSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence KDQPRVINLVDTKNFKETANLLTAENPYDGYQXPSIETGTIKAADGTTDLHYRLXKPANFDPAKKYPVIV
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Known secondary structure (DSSP) TTTTTT


TTTTS



TTSSS
TT

TTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence YVYGGPHAQCVTGGWQNGARGWDTYXASKGYIXFTIDNRGSSNRGLTFENATFRRLGIEEGKDQVKGVEF
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Known secondary structure (DSSP)



TT

SS
SSGGGG

TT


TT
SSS
GGGTTSTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence LKSLPYVDSERIGVHGWSFGGHXTTALXLRYPEIFKVGVAGGPVIDWGYYEIXYGERYXDTPESNPEGYK
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Known secondary structure (DSSP) TSTTT
TTT
SS



GGGSB

TTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence ECNLKNLADQLKGHLLIIHDDHDDTCVPQHTLSFXKACVDARTYPDLFIYPCHKHNVAGRDRVHLHEKIT
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Known secondary structure (DSSP) T
GGGGGGG

STT
SSS
TT


TT

SS

TT
 .......
Sequence RYFEQNL
Predicted secondary structure
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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