PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4q1tD_

Fold library id	PDB Header	Molecule	Title
c4q1tD_	PDB header: transferase	Chain: D: PDB Molecule: glutamate 5-kinase;	PDBTitle: crystal structure of a glutamate 5-kinase from burkholderia2 thailandensis

Links to external resources
Added to library: Sat Apr 26 08:18:07 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P G S M R S I I A D S K R L V V K V G S S L V T N D G L D H D A I G R W A A Q I A A L R N E G K E V V L V S S G A I A E G M Q R L G W S R R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
B
G G G G
S
B
B
T T
T
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P R E I D E L Q A A A A V G Q M G L A Q V Y E S R F A E H G I R T A Q I L L T H A D L A D R E R Y L N A R S T L L T L L R L G V V P I I N E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T T
S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N D T V V T D E I K F G D N D T L G A L V A N L I E G D A L I I L T D Q M L T K I L A A K R A A H S G A N T V I A S G R E R D V L L R L A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S S T
S
T T T
T T S T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence G E A I G T Q L I A R T A R M A A R K Q W M A D H L Q V R G H V V I D A G A V D K L T A G G K S L L P I G V V A V Q G V F A R G E V I A C V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T B
S
S S
T T
B
G G G
T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 .

Sequence N D A G R E V A R G I T N Y S S A E A K L I Q R K P S G E I E A V L G Y M L E P E L I H R D N L V L V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S
T T
G G G S S
S
S B
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	G	S	M	R	S	I	I	A	D	S	K	R	L	V	V	K	V	G	S	S	L	V	T	N	D	G	L	D	H	D	A	I	G	R	W	A	A	Q	I	A	A	L	R	N	E	G	K	E	V	V	L	V	S	S	G	A	I	A	E	G	M	Q	R	L	G	W	S	R	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		B		G	G	G	G		S												B				B																		T	T																			T		S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	R	E	I	D	E	L	Q	A	A	A	A	V	G	Q	M	G	L	A	Q	V	Y	E	S	R	F	A	E	H	G	I	R	T	A	Q	I	L	L	T	H	A	D	L	A	D	R	E	R	Y	L	N	A	R	S	T	L	L	T	L	L	R	L	G	V	V	P	I	I	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S																									T	T	T															S																	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	D	T	V	V	T	D	E	I	K	F	G	D	N	D	T	L	G	A	L	V	A	N	L	I	E	G	D	A	L	I	I	L	T	D	Q	M	L	T	K	I	L	A	A	K	R	A	A	H	S	G	A	N	T	V	I	A	S	G	R	E	R	D	V	L	L	R	L	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T									S	S												T		S																					T	T	T								T	T	S	T	T							T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	E	A	I	G	T	Q	L	I	A	R	T	A	R	M	A	A	R	K	Q	W	M	A	D	H	L	Q	V	R	G	H	V	V	I	D	A	G	A	V	D	K	L	T	A	G	G	K	S	L	L	P	I	G	V	V	A	V	Q	G	V	F	A	R	G	E	V	I	A	C	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	B			S						S	S																																T	T				B		G	G	G										T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
Sequence	N	D	A	G	R	E	V	A	R	G	I	T	N	Y	S	S	A	E	A	K	L	I	Q	R	K	P	S	G	E	I	E	A	V	L	G	Y	M	L	E	P	E	L	I	H	R	D	N	L	V	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S									S	S									T	T			G	G	G						S	S				S		S	B		G	G	G