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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4q0cA_

Fold library idPDB HeaderMoleculeTitle
c4q0cA_PDB header: transferaseChain: A: PDB Molecule: virulence sensor protein bvgs;PDBTitle: 3.1 a resolution crystal structure of the b. pertussis bvgs2 periplasmic domain


Added to library: Sat Feb 14 09:54:57 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SQELTLVGKAAVPDVEVALDGDDWRWLARKRVLTLGVYAPDIPPFDVTYGERYEGLTADYMAIIAHNLGM
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Known secondary structure (DSSP)



S









S
TT

TTT
TTSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence QAKVLRYPTREQALSALESGQIDLIGTVNGTDGRQQSLRLSVPYAADHPVIVMPIGARHVPASNLAGQRL
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Known secondary structure (DSSP) SSTS
S
TTSSSS
S


SB


TT

S

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AVDINYLPKETLARAYPQATLHYFPSSEQALAAVAYGQADVFIGDALTTSHLVSQSYFNDVRVVAPAHIA
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Known secondary structure (DSSP) TTTS
STTSSSTTS
STTTT
S

 .........220.........230.........240.........250.........260.........270.........280
Sequence TGGESFGVRADNTRLLRVVNAVLEAIPPSEHRSLIYRWGLGSSISLDFAHPAYSAREQQWMADHPVVKVA
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Known secondary structure (DSSP)


BTT
S
TT
GGGTTTS








 .........290.........300.........310.........320.........330.........340.........350
Sequence VLNLFAPFTLFRTDEQFGGISAAVLQLLQLRTGLDFEIIGVDTVEELIAKLRSGEADMAGALFVNSARES
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Known secondary structure (DSSP) TTTT
TTS
S

SSTTS
S

TTGGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence FLSFSRPYVRNGMVIVTRQDPDAPVDADHLDGRTVALVRNSAAIPLLQRRYPQAKVVTADNPSEAMLMVA
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Known secondary structure (DSSP) T


S
SSSSS
SSGGG
TT
TT
TSTT
SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence NGQADAVVQTQISASYYVNRYFAGKLRIASALDLPPAEIALATTRGQTELMSILNKALYSISNDELASII
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Known secondary structure (DSSP) TS
ST
TTT
SS

TT
S
 .........500.........510...
Sequence SRWRGSDGDPRTWYAYRNEIYLE
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Known secondary structure (DSSP)






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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