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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4pysB_

Fold library idPDB HeaderMoleculeTitle
c4pysB_PDB header: hydrolaseChain: B: PDB Molecule: beta-n-acetylhexosaminidase;PDBTitle: the crystal structure of beta-n-acetylhexosaminidase from bacteroides2 fragilis nctc 9343


Added to library: Sat Jun 21 08:28:48 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GQIIXPTPGKIERADGRLRLQGKIRXYAEESPGSFIRLFYEKLVPESAVEWCKEEVNSHISWKKDVTLPT
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Known secondary structure (DSSP)



SS

S
SSSS

TS
GGG
SSGGG
S
TTS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence EGYRIRVTPERIIVEAADDAGFIYAIQSLRQWNTGEERGLIFPCVEITDFPRVKWRSFXLDSGRQYQKVS
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Known secondary structure (DSSP) T

SS
SSS

SSSS

SSS
SSS


 .........150.........160.........170.........180.........190.........200.........210
Sequence TIKKYIDXASXLKXNYFHWHLTEGLGWRIEIKRYPFLTRIGAFVGQGPEQQGFYSQEEVKEIIGYAADRG
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Known secondary structure (DSSP) TT


TT
B

TT
TTTTS


STT



B
TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ITVVPEIDXPGHAEAALNAYPRLGCNVAVKVNIFCAGKDSTLIFLKNVLDEVCRXFPSAYIHLGGDEAPK
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Known secondary structure (DSSP)
SSS

GGG











TT



S





 .........290.........300.........310.........320.........330.........340.........350
Sequence CPDCRSRIEKEKLSHDLQLWFSARXADYLKQKGRKAIFWGDVIYKDYSLPDNVVIQWWNWRGHRDLALKN
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Known secondary structure (DSSP)
TTGGGTT

TT
GGGGS





TT

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence AVRHNYPVICGTNYYTYLNFPLTPWKGYTQARTFDLEDVYLRNPSYRPREENPLILGXSSALWTDDGVTE
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Known secondary structure (DSSP) TT



BTTS
SS
BTTB
GGG



TT

TT


TT

TTT

G
 .........430.........440.........450.........460.........470.........480...
Sequence SXIDRRVFPRILALAEQXWHSGNPENFDEFYGKVLSKQLWFEQQGYSFGPALKEDAGTNYKWD
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Known secondary structure (DSSP) GGSTT

SS


TT




SSTTT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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