PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4py3B_

Fold library id	PDB Header	Molecule	Title
c4py3B_	PDB header: protein binding	Chain: B: PDB Molecule: bartonella effector protein (bep) substrate of virb t4ss;	PDBTitle: crystal structure of the n-terminal fic domain of bep8 protein (virb-2 translocated bartonella effector protein) from bartonella sp. 1-1c

Links to external resources
Added to library: Sat Jun 13 08:25:19 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence H M A R N Y A Y P H M N T L K N K H N I M S T K K L A H V C E H Y A K K A I I N L N K E P L P Q K F D S S Y L K Y I H Q R L F E S T F E W A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B G G G G B
S S S S S B
T T
T T S
S S
S T T T
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G Y T R D F S F T F D D G T V A E M P M M K V P N L D I F Y V Q G N D I Q E N L K K F D Q L L A S K N N L Q G L S R E E F V D E A A K L F V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T S
T T S
S
B
T T S S
B
G G G T G G G
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence F L N S I A P F R A G N E P T Q R V F F E K L A E A A G H Q L D F S V A T E K R I M R A C I D G M T L K D N M A Y K E M K S L F E D I S D P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T
G G G S
S
T T G G G T
T

. . .

Sequence K K I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	M	A	R	N	Y	A	Y	P	H	M	N	T	L	K	N	K	H	N	I	M	S	T	K	K	L	A	H	V	C	E	H	Y	A	K	K	A	I	I	N	L	N	K	E	P	L	P	Q	K	F	D	S	S	Y	L	K	Y	I	H	Q	R	L	F	E	S	T	F	E	W	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B	G	G	G	G	B		S	S	S	S	S	B			T	T																								T	T	S				S	S		S													T	T	T		T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	Y	T	R	D	F	S	F	T	F	D	D	G	T	V	A	E	M	P	M	M	K	V	P	N	L	D	I	F	Y	V	Q	G	N	D	I	Q	E	N	L	K	K	F	D	Q	L	L	A	S	K	N	N	L	Q	G	L	S	R	E	E	F	V	D	E	A	A	K	L	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T			T	T	S					T	T	S						S			B		T	T	S	S		B				G	G	G															T	G	G	G		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	L	N	S	I	A	P	F	R	A	G	N	E	P	T	Q	R	V	F	F	E	K	L	A	E	A	A	G	H	Q	L	D	F	S	V	A	T	E	K	R	I	M	R	A	C	I	D	G	M	T	L	K	D	N	M	A	Y	K	E	M	K	S	L	F	E	D	I	S	D	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	S																	T	T					G	G	G	S															S		T	T	G	G	G											T		T
	.	.	.
Sequence	K	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T