PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4pw1B_

Fold library id	PDB Header	Molecule	Title
c4pw1B_	PDB header: structural genomics, unknown function	Chain: B: PDB Molecule: uncharacterized protein;	PDBTitle: crystal structure of a hypothetical protein (clolep_02462) from2 clostridium leptum dsm 753 at 2.10 a resolution

Links to external resources
Added to library: Sat Jun 21 09:57:27 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N L L Y L N S G E E L N L Y P W N L Y T G Q E Q E L F E E E I V S F A A N S V R I L G G G S W T D E E L Y P L I K F R Y S G Q D L R F L K D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T
T T G G G
S
T
G G G
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence X A L T E K D G R R Y L V N X A L D P N G L C Y F S Y V N Q D E R E A T A D E X D Q A L G K L Q E D W E K F L S D P L P A K T D N A F Y X F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence F X R C Q X L S D Q X R K E Q Y S D Y I G D N L Y T I W E L V L K S E F T S L S Y D N H I Y A X Y S N D G G T S X V L I Y S P I E E R F V G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S S
T T
T T S
T T T T

. . . . .

Sequence F S L K Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	L	L	Y	L	N	S	G	E	E	L	N	L	Y	P	W	N	L	Y	T	G	Q	E	Q	E	L	F	E	E	E	I	V	S	F	A	A	N	S	V	R	I	L	G	G	G	S	W	T	D	E	E	L	Y	P	L	I	K	F	R	Y	S	G	Q	D	L	R	F	L	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B			T	T						T	T	G	G	G			S																						T										G	G	G							T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	X	A	L	T	E	K	D	G	R	R	Y	L	V	N	X	A	L	D	P	N	G	L	C	Y	F	S	Y	V	N	Q	D	E	R	E	A	T	A	D	E	X	D	Q	A	L	G	K	L	Q	E	D	W	E	K	F	L	S	D	P	L	P	A	K	T	D	N	A	F	Y	X	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S											T	T										T	T																											S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	X	R	C	Q	X	L	S	D	Q	X	R	K	E	Q	Y	S	D	Y	I	G	D	N	L	Y	T	I	W	E	L	V	L	K	S	E	F	T	S	L	S	Y	D	N	H	I	Y	A	X	Y	S	N	D	G	G	T	S	X	V	L	I	Y	S	P	I	E	E	R	F	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	S			S	S														S								T	T									T	T	S									T	T	T	T
	.	.	.	.	.
Sequence	F	S	L	K	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)