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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4pshA_

Fold library idPDB HeaderMoleculeTitle
c4pshA_PDB header: protein transportChain: A: PDB Molecule: abc-type transporter, periplasmic subunit family 3;PDBTitle: structure of holo argbp from t. maritima


Added to library: Sat Jul 26 08:53:08 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IDEIKSRGYLLVGLSADFPPFEFVDENGNIVGFDVDLAKEIARRLGVELKIVDMTFDGLIPSLLTKKIDV
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Known secondary structure (DSSP)
T
S
BTTTB
TTS
STTS

GGGTTS
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence IISGMTITEERKKVVAFSDPYFDAGQVIVVRKDSDFRPKTYEDLVGKTVAVQIGTTGDIEVSKYDGIKVV
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Known secondary structure (DSSP)

TTS
S


SSSS



SGGGGTTSTTSTT
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence RFDKFTDAFLELKRGRADAVVLDSATARAFVAKNPDLVISSGVLSSEQYGIAVRKEDTDLLEFINSVLRE
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Known secondary structure (DSSP) SSTSSST
TT
S





TT
 .........220......
Sequence LKKSPYDVLIEKWFSR
Predicted secondary structure


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Known secondary structure (DSSP) T


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Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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