PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c4prkB_

Fold library id	PDB Header	Molecule	Title
c4prkB_	PDB header: oxidoreductase	Chain: B: PDB Molecule: 4-phosphoerythronate dehydrogenase;	PDBTitle: crystal structure of d-lactate dehydrogenase (d-ldh) from2 lactobacillus jensenii

Links to external resources
Added to library: Sat Jun 21 08:31:16 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K I A V F S P S E S E R K L V A A T E K K F G C E L K L I D E S L S A E N V D Q V A D C D G V L L K P L G N L D D E I V Y K K L A D Y G I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T
S S
T T T G G G G T T
S
S S
B
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K S I G L R I V G T N T I D F D L A K K Y H L T V T N V P V Y S P R A I A E M A V T Q A M Y L N R K I G E F K A N M D K G D F T N P D S L I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T B
T T T
S
T T T
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S N E I Y N K T I G L I G V G H I G S A V A Q I F S A M G A K V L A Y D V I Y N P E V E P Y L T Y A D F D T V L K E A D I I S L H T P L L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
S
T T
S S
G G G T T T
S
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence S T E N M I G K K Q F A E M K N D A I L I N A A R G E L V D T A A L I E A L E K H E I A A A G L D T L A H E S S Y F F K K V D D A Q I P A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
B S S
T T
S
G G G B
T S S S S
T T G G G T T T S
G G G S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . .

Sequence Y K K L A A M P N V I V T P H S A Y F T K T S V R N M I E I S L R D T I A L A N G E R A H F V V S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
S S
T T
S T T
T T B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	I	A	V	F	S	P	S	E	S	E	R	K	L	V	A	A	T	E	K	K	F	G	C	E	L	K	L	I	D	E	S	L	S	A	E	N	V	D	Q	V	A	D	C	D	G	V	L	L	K	P	L	G	N	L	D	D	E	I	V	Y	K	K	L	A	D	Y	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S							T	T									T							S	S				T	T	T	G	G	G	G	T	T		S							S	S		B			T									T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	S	I	G	L	R	I	V	G	T	N	T	I	D	F	D	L	A	K	K	Y	H	L	T	V	T	N	V	P	V	Y	S	P	R	A	I	A	E	M	A	V	T	Q	A	M	Y	L	N	R	K	I	G	E	F	K	A	N	M	D	K	G	D	F	T	N	P	D	S	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S			T	T	B							T	T	T									S																			T										T	T						G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	N	E	I	Y	N	K	T	I	G	L	I	G	V	G	H	I	G	S	A	V	A	Q	I	F	S	A	M	G	A	K	V	L	A	Y	D	V	I	Y	N	P	E	V	E	P	Y	L	T	Y	A	D	F	D	T	V	L	K	E	A	D	I	I	S	L	H	T	P	L	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G							S															T	T								S	S			G	G	G	T	T	T														S										T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	S	T	E	N	M	I	G	K	K	Q	F	A	E	M	K	N	D	A	I	L	I	N	A	A	R	G	E	L	V	D	T	A	A	L	I	E	A	L	E	K	H	E	I	A	A	A	G	L	D	T	L	A	H	E	S	S	Y	F	F	K	K	V	D	D	A	Q	I	P	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T		B	S							S		T	T							S		G	G	G	B												T	S	S	S					S			T	T	G	G	G	T	T	T	S				G	G	G	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Sequence	Y	K	K	L	A	A	M	P	N	V	I	V	T	P	H	S	A	Y	F	T	K	T	S	V	R	N	M	I	E	I	S	L	R	D	T	I	A	L	A	N	G	E	R	A	H	F	V	V	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T		T	T					S	S		T	T		S																				T	T				T	T	B