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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4pprA_

Fold library idPDB HeaderMoleculeTitle
c4pprA_PDB header: hydrolaseChain: A: PDB Molecule: penicillin-binding protein dacb1;PDBTitle: crystal structure of mycobacterium tuberculosis d,d-peptidase rv33302 in complex with meropenem


Added to library: Sat Nov 8 08:22:14 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PLPLVVPPTPVGGNALGGCGIITAPGSAPAPGDVSAEAWLVADLDSGAVIAARDPHGRHRPASVIKVLVA
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Known secondary structure (DSSP)






SS
TT
GGGG
SS
TT




TT


STTT
STT

B

GGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence MASINTLTLNKSVAGTADDAAVEGTKVGVNTGGTYTVNQLLHGLLMHSGNDAAYALARQLGGMPAALEKI
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Known secondary structure (DSSP) S
TT


SSS





TT
S

TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence NLLAAKLGGRDTRVATPSGLDGPGMSTSAYDIGLFYRYAWQNPVFADIVATRTFDFPGHGDHPGYELEND
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Known secondary structure (DSSP) TT
TT
B
S
SS



TT
BB
TST
S

BTTB



 .........220.........230.........240.........250.........260.........270.........280
Sequence NQLLYNYPGALGGKTGYTDDAGQTFVGAANRDGRRLMTVLLHGTRQPIPPWEQAAHLLDYGFNTPAGTQI
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Known secondary structure (DSSP)
STTTTTTT
S
SS
S
TT

S
 .........290.........300
Sequence GTLIEPDPSLMSTDRRVDPQ
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Known secondary structure (DSSP)




GGGGS




S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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