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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4pmuD_

Fold library idPDB HeaderMoleculeTitle
c4pmuD_PDB header: hydrolaseChain: D: PDB Molecule: endo-1,4-beta-xylanase a;PDBTitle: crystal structure of a novel family 10 glycoside hydrolase (space2 group p1211)


Added to library: Sat Oct 11 08:34:50 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TSLKQAYAQGFLLGTAVNADIVSGKDAASAALVACHFNAVTAENVMKAEVVAPRRGVQDFSAADAFVAYA
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Known secondary structure (DSSP)

TTTT

TSS
SSSTTS

STT



 .........80.........90.........100.........110.........120.........130.........140
Sequence QRDRQFVVGHTLVWHNQTPEWFFTTADGRPNTPAQQLERMRAHIAAVAGRYTGKVQAWDVVNEIIDEDGS
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Known secondary structure (DSSP) TTT

SSS

GGGGB
TTSSB

TTTTBTTB
S
B
TTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence YRSTNWVQRVGDGDTVVRNAFAFAQRYAPDAQLYYNDFNAWRPAKREGIVRMVKMLQQAGVRIDGVGMQG
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Known secondary structure (DSSP) B


S

TT
SSTT
TT





 .........220.........230.........240.........250.........260.........270.........280
Sequence HWGLNYPSLRDIEDAIDAYAALGVKVMITELDIDVLPLTKEGQIIGTGMAHKQFQLPEFKRFLDPYRDGL
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Known secondary structure (DSSP) SS


TTTS
STTTTSS


SSGGGSGGGGS


TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence PADVQAQLRDRYAELFALFWRKRDKIARVSVWGVSDDMSWKNDYPVPGRTNYPLLFDRNHQPKPALDAVV
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Known secondary structure (DSSP)
TGGGS
SBGGG
TTTTSSSTT




SSB
TTS
B
 .....
Sequence AVPSA
Predicted secondary structure

SS confidence




Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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