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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4plpB_

Fold library idPDB HeaderMoleculeTitle
c4plpB_PDB header: transferaseChain: B: PDB Molecule: homospermidine synthase;PDBTitle: crystal structure of the homospermidine synthase (hss) from2 blastochloris viridis in complex with nad


Added to library: Sat May 30 08:12:49 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DWPVYHRIDGPIVMIGFGSIGRGTLPLIERHFAFDRSKLVVIDPSDEARKLAEARGVRFIQQAVTRDNYR
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Known secondary structure (DSSP)






S


S

GGG


TTT






TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence ELLVPLLTAGPGQGFCVNLSVDTSSLDIMELARENGALYIDTVVEPWLGFYFDPDLKPEARSNYALRETV
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Known secondary structure (DSSP) T

SS



SSS
TT
SS



TTTT

TT

GGGGS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LAARRNKPGGTTAVSCCGANPGMVSWFVKQALVNLAADLGVTGEEPTTREEWARLAMDLGVKGIHIAERD
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Known secondary structure (DSSP) S
SSS
S
BBTTBTT

SS


ST

 .........220.........230.........240.........250.........260.........270.........280
Sequence TQRASFPKPFDVFVNTWSVEGFVSEGLQPAELGWGTFERWMPDNARGHDSGCGAGIYLLQPGANTRVRSW
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Known secondary structure (DSSP)


BSS


TTSS
S

TT




TT

SSSSS
GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence TPTAMAQYGFLVTHNESISIADFLTVRDAAGQAVYRPTCHYAYHPCNDAVLSLHEMFGSGKRQSDWRILD
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Known secondary structure (DSSP) TTT



T

TTS




TS

S

 .........360.........370.........380.........390.........400.........410.........420
Sequence ETEIVDGIDELGVLLYGHGKNAYWYGSQLSIEETRRIAPDQNATGLQVSSAVLAGMVWALENPNAGIVEA
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Known secondary structure (DSSP) GGGB
S
SSTTS
SS

STT

G
 .........430.........440.........450.........460.........470.....
Sequence DDLDFRRCLEVQTPYLGPVVGVYTDWTPLAGRPGLFPEDIDTSDPWQFRNVLVRD
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Known secondary structure (DSSP) GGS
GGGS




TTTT
S
SS




TT
TTSB



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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