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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4ploA_

Fold library idPDB HeaderMoleculeTitle
c4ploA_PDB header: protein bindingChain: A: PDB Molecule: netrin-1;PDBTitle: crystal structure of chicken netrin-1 (ln-le3) in complex with mouse2 dcc (fn4-5)


Added to library: Sat Jun 21 08:36:02 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PDPCYDEHGLPRRCIPDFVNSAFGKEVKVSSTCGKPPSRYCVVTEKGEEQVRSCHLCNASDPKRAHPPSF
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Known secondary structure (DSSP)

TTB
TTS
B

B



TTTT


S

TTSS
TT
SSSTTT


T
 .........80.........90.........100.........110.........120.........130.........140
Sequence LTDLNNPHNLTCWQSDSYVQYPHNVTLTLSLGKKFEVTYVSLQFCSPRPESMAIYKSMDYGKTWVPFQFY
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Known secondary structure (DSSP) S


SSS




S


TT

SS


SSSTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence STQCRKMYNKPSRAAITKQNEQEAICTDSHTDVRPLSGGLIAFSTLDGRPTAHDFDNSPVLQDWVTATDI
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Known secondary structure (DSSP)
S
TS

TT



TT
SS


TT

S
SSSSTTTT
TTTT
GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence KVTFSRLHTFDDSELARDSYFYAVSDLQVGGRCKCNGHASRCVRDRDDNLVCDCKHNTAGPECDRCKPFH
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Known secondary structure (DSSP)





ST




TTB
S

TTS



SSTTTS

TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence YDRPWQRATAREANECVACNCNLHARRCRFNMELYKLSGRKSGGVCLNCRHNTAGRHCHYCKEGFYRDLS
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Known secondary structure (DSSP) BTS





SS




B



TTS
S

TTSS





TTSSSS

TT
SS
 .........360.........370.........380.........390.........400.........410..
Sequence KPISHRKACKECDCHPVGAAGQTCNQTTGQCPCKDGVTGITCNRCAKGYQQSRSPIAPCIKI
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Known secondary structure (DSSP) S
TTSTT




TTTBSSS


TTT



B
TTTTTT

TT
S
SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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