Fold library entry viewer: c4pkcA_

Added to library: Sat Jul 5 08:33:02 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	N	F	T	P	E	D	P	A	E	E	T	I	P	A	D	E	L	H	E	H	L	Q	K	P	S	T	A	R	T	K	R	L	K	E	R	C	R	W	K	H	A	S	A	G	E	F	I	E	K	S	V	T	A	G	I	E	R	M	R	Y	L	T	E	A	H	K	A	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	G	G	G	G	T	S		G	G	G	G	G	G	S					S	S									T								T	T			S	S	T	T																		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	K	P	E	A	I	R	R	A	L	G	L	A	N	V	L	N	K	S	T	L	V	L	Q	E	D	E	F	I	V	G	Y	H	A	E	D	P	N	M	F	P	L	Y	P	E	L	S	H	M	A	V	Q	D	Y	L	R	S	D	Y	S	P	Q	P	A	D	E	A	A	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S																							T	T		S	S				S	S	S	S	T	T						T	T	T										T	S	T	T			S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	E	Y	W	K	P	H	S	L	Q	S	K	C	Q	P	Y	F	D	P	A	D	L	G	R	M	Y	Q	V	S	S	M	E	A	P	S	F	A	S	G	Y	N	S	I	V	P	P	Y	E	T	V	L	E	D	G	L	L	A	R	I	K	L	A	E	K	H	I	A	E	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G	S						G	G	G	S										T		S	S	B											B
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	D	M	S	T	F	P	W	N	G	T	K	G	L	D	N	I	A	K	I	D	N	W	K	A	M	V	I	A	C	K	A	V	I	S	W	A	R	R	Q	G	R	L	C	K	I	V	A	E	N	F	E	T	D	P	K	R	Q	A	E	L	L	E	I	A	D	I	C	Q	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	S	S	S			T	T	T	T	T																																					T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	I	P	A	E	P	C	K	G	L	K	D	A	M	Q	A	K	F	F	T	F	L	I	C	H	A	I	E	R	Y	A	S	G	Y	A	Q	K	E	D	T	L	L	W	P	Y	Y	K	A	S	V	V	D	K	K	F	Q	P	M	S	H	M	D	A	V	E	L	V	E	M	E	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	S				S																	T	T	S	S			B					B													T	T	S		S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	K	I	S	E	H	G	A	G	K	S	R	A	Y	R	E	I	F	P	G	S	N	D	L	F	I	L	T	V	G	G	T	N	A	K	G	E	D	A	C	N	D	M	T	D	A	I	L	E	A	A	K	R	I	R	T	A	E	P	S	I	V	F	R	Y	S	K	K	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T							T					S	S	T	T	B	S										B		T	T	S		B																			S		S								T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	E	K	T	L	R	W	V	F	E	C	I	R	D	G	L	G	Y	P	S	I	K	H	D	E	I	G	T	E	Q	M	K	E	Y	A	K	F	S	L	N	G	N	G	A	T	D	E	E	A	H	N	W	V	N	V	L	C	M	S	P	G	I	H	G	R	R	K	T	Q	K	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T				S																	T	T		T	T	S					T	T	G	G	G					S	S	S	S						S	S	S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	R	S	E	G	G	G	S	I	F	P	A	K	L	L	E	I	S	L	N	D	G	Y	D	W	S	Y	A	D	M	Q	L	G	P	K	T	G	D	L	S	S	L	K	S	F	E	D	V	W	E	A	F	R	K	Q	Y	Q	Y	A	I	N	L	C	I	S	T	K	D	V	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	S														T	T	T	T			T	T	T	T					S						T	T	T			S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	Y	F	E	Q	R	F	L	Q	M	P	F	V	S	A	I	D	D	G	C	M	E	L	G	M	D	A	C	A	L	S	E	Q	P	N	G	W	H	N	P	I	T	T	I	V	A	A	N	S	L	V	A	I	K	K	L	V	F	E	E	K	K	Y	T	L	E	Q	L	S	Q	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S								T								T			T	T	T				S									S																T	T	S		S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	L	K	A	N	W	E	G	F	E	E	M	R	V	D	F	K	R	A	P	K	W	G	N	D	D	D	Y	A	D	G	I	I	T	R	F	Y	E	E	I	I	G	G	E	M	R	K	I	T	N	Y	S	G	G	P	V	M	P	T	G	Q	A	V	G	L	Y	M	E	V	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	S	S											S			T	T	S																T	T	T					T		B		T	T	S		B									S						T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	R	T	G	P	T	P	D	G	R	F	G	G	E	A	A	D	D	G	G	I	S	P	Y	M	G	T	D	K	K	G	P	T	A	V	L	R	S	V	S	K	V	Q	K	L	L	N	Q	R	L	S	V	P	I	M	R	S	K	H	G	F	E	I	W	N	S	Y	I	K	T	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S				T	T	T			T	T					S	S	S	S	S			T	T	T			S										T	T															S	S	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	H	D	L	N	I	D	H	V	Q	F	N	V	V	S	T	D	E	M	R	A	A	Q	R	E	P	E	K	H	H	D	L	I	V	R	V	S	G	Y	S	A	R	F	V	D	I	P	T	Y	G	Q	N	T	I	I	A	R	Q	E	Q	D	F	S	A	S	D	L	E	F	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																					G	G	G		T	T						S	S	S				G	G	G	S										T	S													T	T
	.	.	.
Sequence	V	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)

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PDB structure

FASTA sequence

Hidden Markov model

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