Fold library entry viewer: c4pjwA_

Added to library: Sat Aug 30 08:16:36 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	L	F	E	V	V	K	X	G	S	A	X	Q	S	V	V	D	D	W	I	E	S	Y	K	H	D	R	D	I	A	L	L	D	L	I	N	F	F	I	Q	C	S	G	C	K	G	V	V	T	A	E	X	F	R	H	X	Q	N	S	E	I	I	R	K	X	T	E	E	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																									T	T	T																									T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	D	S	G	D	Y	P	L	T	X	A	G	P	Q	W	K	K	F	K	S	S	F	C	E	F	I	G	V	L	V	R	Q	C	Q	Y	S	I	I	Y	D	E	Y	X	X	D	T	V	I	S	L	L	T	G	L	S	D	S	Q	V	R	A	F	R	H	T	S	T	L	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S			T	T	T			S																				T	T	T	T	T	G	G	G	S	S	S													T	T		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	X	K	L	X	T	A	L	V	N	V	A	L	N	L	S	I	N	X	D	N	T	Q	R	Q	Y	E	A	E	R	N	K	A	N	E	R	L	E	L	L	L	Q	K	R	K	E	L	Q	E	N	Q	D	E	I	E	N	X	X	N	A	I	F	K	G	V	F	V	H	R	Y	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																																T					T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	D	A	I	A	E	I	R	A	I	C	I	E	E	I	G	I	W	X	K	X	Y	S	D	A	F	L	N	D	S	Y	L	K	Y	V	G	W	T	X	H	D	K	Q	G	E	V	R	L	K	C	L	T	A	L	Q	G	L	Y	Y	N	K	E	L	N	S	K	L	E	L	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S																		S						S											T	T		S	S													T	T	T	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	R	F	K	D	R	I	V	S	X	T	L	D	K	E	Y	D	V	A	V	Q	A	I	K	L	L	T	L	V	L	Q	S	S	E	E	V	L	T	A	E	D	C	E	N	V	Y	H	L	V	Y	S	A	H	R	P	V	A	V	A	A	G	E	F	L	Y	K	K	L	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										G	G	G		S	S																		T	S	S	S												G	G	G		S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	G	P	N	A	N	L	V	K	T	L	V	F	F	F	L	E	S	E	L	H	E	H	A	A	Y	L	V	D	S	X	W	D	C	A	T	E	L	L	K	D	W	E	C	X	N	S	L	L	L	E	E	L	T	D	R	Q	E	S	A	L	I	E	I	X	L	C	T	I	R	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S															S	S		S	S	S								T	T	T	S					T									T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	A	E	C	H	P	P	V	G	R	G	T	L	T	A	K	E	K	K	T	Q	L	D	D	R	T	K	I	T	E	L	F	A	V	A	L	P	Q	L	L	A	K	Y	S	V	D	A	E	K	V	T	N	L	L	Q	L	P	Q	Y	F	D	L	E	I	Y	T	T	G	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S		S			T	T	S																																		T	T									T	T	G	G	G	G			T	T					T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	K	H	L	D	A	L	L	R	Q	I	R	N	I	V	E	K	H	T	D	T	D	V	L	E	A	C	S	K	T	Y	H	A	L	C	N	E	E	F	T	I	F	N	R	V	D	I	S	R	S	Q	L	I	D	E	L	A	D	K	F	N	R	L	L	E	D	F	L	Q	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																			T		T	T	S	T	T																												S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	E	E	P	D	E	D	D	A	Y	Q	V	L	S	T	L	K	R	I	T	A	F	H	N	A	H	D	L	S	K	W	D	L	F	A	C	N	Y	K	L	L	K	T	G	I	E	N	G	D	X	P	E	Q	I	V	I	H	A	L	Q	C	T	H	Y	V	I	L	W	Q	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S																								S			T	T	S		T															S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	K	I	S	T	K	E	D	L	L	R	L	K	K	Q	X	R	V	F	C	Q	I	C	Q	H	Y	L	T	N	V	N	T	T	V	K	E	Q	A	F	T	I	L	C	D	I	L	X	I	F	S	H	Q	I	X	S	G	G	R	D	X	L	E	P	L	V	Y	T	P	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S																				G	G	G		S																			T	S	G	G	G	T	T	T	T		S	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	S	L	Q	S	E	L	L	S	F	I	L	D	H	V	F	I	E	S	K	I	E	A	L	H	K	R	R	N	L	L	A	A	F	C	K	L	I	V	Y	T	V	V	E	X	N	T	A	A	D	I	F	K	Q	Y	X	K	Y	Y	N	D	Y	G	D	I	I	K	E	T	X	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T																									T	T	S	S		G	G	G	G					T	T	T	T	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	K	T	R	Q	I	D	K	I	Q	C	A	K	T	L	I	L	S	L	Q	Q	L	F	N	E	X	I	Q	E	N	G	Y	N	F	D	R	S	S	S	T	F	S	G	I	K	E	L	A	R	R	F	A	L	T	F	K	T	R	E	A	I	A	X	L	H	K	D	G	I	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T																										T	T			T	T	S															T	T			T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.
Sequence	A	F	K	E	P	N	P	Q	G	E	S	P	L	N	L	A	F	L	D	I	L	S	E	F	S	S	K	L	L	R	Q	D	K	R	T	V	Y	V	Y	L	E	K	F	X	T	F	Q	X	S	L	R	R	E	V	W	L	P	L	X	S	Y	R	N	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	S	S			S	S	S					S	T	T						T	T	T	T	T	T	S													T	T	T																					T

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PDB structure

FASTA sequence

Hidden Markov model

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