Fold library entry viewer: c4pj6B_

Added to library: Sat Dec 6 08:36:15 2014
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	F	P	W	A	Q	I	R	L	P	T	A	V	V	P	L	R	Y	E	L	S	L	H	P	N	L	T	S	M	T	F	R	G	S	V	T	I	S	V	Q	A	L	Q	V	T	W	N	I	I	L	H	S	T	G	H	N	I	S	R	V	T	F	M	E	K	Q	A	E	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			S	S	S			S	S														T	T	T	T													S	S											S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	Y	A	Y	H	G	Q	I	A	I	V	A	P	E	A	L	L	A	G	H	N	Y	T	L	K	I	E	Y	S	A	N	I	S	S	S	Y	Y	G	F	Y	G	F	S	Y	T	D	E	S	N	E	K	K	Y	F	A	A	T	Q	F	E	P	L	A	A	R	S	A	F	P	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T												T	T														B	S	S	S	S										T	T												T	T	T						S		B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	D	E	P	A	F	K	A	T	F	I	I	K	I	I	R	D	E	Q	Y	T	A	L	S	N	M	P	K	K	S	S	V	V	L	D	D	G	L	V	Q	D	E	F	S	E	S	V	K	M	S	T	Y	L	V	A	F	I	V	G	E	M	K	N	L	S	Q	D	V	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S			B										T	T						S	S									T	T	S											S	B		G	G	G									B						S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	T	L	V	S	I	Y	A	V	P	E	K	I	G	Q	V	H	Y	A	L	E	T	T	V	K	L	L	E	F	F	Q	N	Y	F	E	I	Q	Y	P	L	K	K	L	D	L	V	A	I	P	D	F	E	A	G	A	M	E	N	W	G	L	L	T	F	R	E	E	T	L	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S								G	G	G	G	G	G																			S		S				S	S								S		S	S							T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	S	N	T	S	S	M	A	D	R	K	L	V	T	K	I	I	A	H	E	L	A	H	Q	W	F	G	N	L	V	T	M	K	W	W	N	D	L	W	L	N	E	G	F	A	T	F	M	E	Y	F	S	L	E	K	I	F	K	E	L	S	S	Y	E	D	F	L	D	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T																			T	T	T	B	T	T	T	B			S	S	G	G	G																			T	S	G	G	G		T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	F	K	T	M	K	K	D	S	L	N	S	S	H	P	I	S	S	S	V	Q	S	S	E	Q	I	E	E	M	F	D	S	L	S	Y	F	K	G	S	S	L	L	L	M	L	K	T	Y	L	S	E	D	V	F	Q	H	A	V	V	L	Y	L	H	N	H	S	Y	A	S	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	S	T	T				S	S					S	T	T					T																				S																	T	T	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	S	D	D	L	W	D	S	F	N	E	V	T	N	Q	T	L	D	V	K	R	M	M	K	T	W	T	L	Q	K	G	F	P	L	V	T	V	Q	K	K	G	K	E	L	F	I	Q	Q	E	R	F	F	L	N	T	S	Y	L	W	H	I	P	L	S	Y	V	T	E	N	Y	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T	T	T	T	S	S			T	T							S	S	S	S										S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	K	Y	Q	S	V	S	L	L	D	K	K	S	G	V	I	N	L	T	E	E	V	L	W	V	K	V	N	I	N	M	N	G	Y	Y	I	V	H	Y	A	D	D	D	W	E	A	L	I	H	Q	L	K	I	N	P	Y	V	L	S	D	K	D	R	A	N	L	I	N	N	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S							S	S			S					S	G	G	G		S	S																					G	G	G	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	E	L	A	G	L	G	K	V	P	L	K	R	A	F	D	L	I	N	Y	L	G	N	E	N	H	T	A	P	I	T	E	A	L	F	Q	T	D	L	I	Y	N	L	L	E	K	L	G	Y	M	D	L	A	S	R	L	V	T	R	V	F	K	L	L	Q	N	Q	I	Q	Q	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	S	S									G	G	G	G	G	G																									T																S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	T	W	T	D	E	G	T	P	S	M	R	E	L	R	S	A	L	L	E	F	A	C	T	H	N	L	G	N	C	S	T	T	A	M	K	L	F	D	D	W	M	A	S	N	G	T	Q	S	L	P	T	D	V	M	T	T	V	F	K	V	G	A	K	T	D	K	G	W	S	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S			S																		T	T		T	T															T	T	T		S				T	T	T									T	T	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	L	L	G	K	Y	I	S	I	G	S	E	A	E	K	N	K	I	L	E	A	L	A	S	S	E	D	V	R	K	L	Y	W	L	M	K	S	S	L	N	G	D	N	F	R	T	Q	K	L	S	F	I	I	R	T	V	G	R	H	F	P	G	H	L	L	A	W	D	F	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S													T	T		S														T	T	S	S	S		G	G	G									T	T	S	T	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	E	N	W	N	K	L	V	Q	K	F	P	L	G	S	Y	T	I	Q	N	I	V	A	G	S	T	Y	L	F	S	T	K	T	H	L	S	E	V	Q	A	F	F	E	N	Q	S	E	A	T	F	R	L	R	C	V	Q	E	A	L	E	V	I	Q	L	N	I	Q	W	M	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T								S		T	T											T	T	T	T			S													T	T						S
	.	.	.	.	.	.	.	.	.	850
Sequence	N	L	K	S	L	T	W	W	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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