PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4pj3A_

Fold library id	PDB Header	Molecule	Title
c4pj3A_	PDB header: rna binding protein	Chain: A: PDB Molecule: intron-binding protein aquarius;	PDBTitle: structural insight into the function and evolution of the spliceosomal2 helicase aquarius, structure of aquarius in complex with amppnp

Links to external resources
Added to library: Sat Jan 24 08:35:45 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N A E F V T Q L A C K Y W A P H I K K K S P F D I K V I E D I Y E K E I V K S R F A I R K I X L L E F S Q Y L E N Y L W X N Y S P E V S S K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S S
S
T T T T T T S
T T T T G G G
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A Y L X S I C C X V N E K F R E N V P A W E I F K K K P D H F P F F F K H I L K A A L A E T D G E F S L H E Q T V L L L F L D H C F N S L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S
T T S
T T S S S
T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V D L I R S Q V Q Q L I S L P X W X G L Q L A R L E L E L K K T P K L R K F W N L I K K N D E K X D P E A R E Q A Y Q E R R F L S Q L I Q K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S G G G G G G S
S T T T S
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence F I S V L K S V P L S E P V T X D K V H Y C E R F I E L X I D L E A L L P T R R W F N T I L D D S H L L V H C Y L S N L V R R E E D G H L F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S S S
T S T T T S
T T T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence S Q L L D X L K F Y T G F E I N D Q T G N A L T E N E X T T I H Y D R I T S L Q R A A F A H F P E L Y D F A L S N V A E V D T R E S L V K F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S B
T T T
B
G G G S
S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence F G P L S S N T L H Q V A S Y L C L L P T L P K N E D T T F D K E F L L E L L V S R H E R R I S Q I Q Q L N Q X P L Y P T E K I I W D E N I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T S S
T T
S S
S
T
S S
T
T T T

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence V P T E Y Y S G E G C L A L P K L N L Q F L T L H D Y L L R N F N L F R L E S T Y E I R Q D I E D S V S R X K P W Q S E Y G G V V F G G W A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
S S S
S
S S
S S T
T T S
S S

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence R X A Q P I V A F T V V E V A K P N I G E N W P T R V R A D V T I N L N V R D H I K D E W E G L R K H D V C F L I T V R P T K P Y G T K F D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S
S
S
S
T T
T T
S
T T

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence R R R P F I E Q V G L V Y V R G C E I Q G X L D D K G R V I E P R P N L R G E S R T F R V F L D P N Q Y Q Q D X T N T I Q N G A E D V Y E T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T B
T T S
B
S S
G G G

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence F N I I X R R K P K E N N F K A V L E T I R N L X N T D C V V P D W L H D I I L G Y G D P S S A H Y S K X P N Q I A T L D F N D T F L S I E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
S
T T
S
T T T T S G G G
T T
S T S
S S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence H L K A S F P G H N V K V T V E D P A L Q I P P F R I T F P V E A K T L I V E P H V I P N R G P Y P Y N Q P K R N T I Q F T H T Q I E A I R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S
T T T
S S
S
S
G G G S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence A G X Q P G L T X V V G P P G T G K T D V A V Q I I S N I Y H N F P E Q R T L I V T H S N Q A L N Q L F E K I X A L D I D E R H L L R L G H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T S
T T
S
T T S S
G G G
S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence G E E E L E T E K D F S R Y G R V N Y V L A R R I E L L E E V K R L Q K S L G V P G D A S Y T C E T A G Y F F L Y Q V X S R W E E Y I S K V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S
S T T
S
T

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence K N P D V T E V S T F F P F H E Y F A N A P Q P I F K G R S Y E E D X E I A E G C F R H I K K I F T Q L E E F R A S E L L R S G L D R S K Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T T T T T T T S S S
S
S S
T
S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence L L V K E A K I I A X T C T H A A L K R H D L V K L G F K Y D N I L X E E A A Q I L E I E T F I P L L L Q N P Q D G F S R L K R W I X I G D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S T
S S S G G G S B G G G G S S
B T T B

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence H H Q L P P V I K N X A F Q K Y S N X E Q S L F T R F V R V G V P T V D L D A Q G R A R A S L C N L Y N W R Y K N L G N L P H V Q L L P E F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S T
T T
B T
S S
T T S S S
G G G

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence S T A N A G L L Y D F Q L I N V E D F Q G V G E S E P N P Y F Y Q N L G E A E Y V V A L F X Y X C L L G Y P A D K I S I L T T Y N G Q K H L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T B
T T B S S S
B T T B S S B
S S T T
B
T
G G G S

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence I R D I I N R R C G N N P L I G R P N K V T T V D R F Q G Q Q N D Y I L L S L V R T R A V G H L R D V R R L V V A X S R A R L G L Y I F A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
T T
S
G G G G T T
S S
G G G G S T T S

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence V S L F Q N C F E L T P A F S Q L T A R P L H L H I I P T E P F P T T R K N G E R P S H E V Q I I K N X P Q X A N F V Y N X Y X H L I Q T T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
G G G T T S
S S
T T
S S
B S S S
S S
S

. . . . .

Sequence H H Y H Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	A	E	F	V	T	Q	L	A	C	K	Y	W	A	P	H	I	K	K	K	S	P	F	D	I	K	V	I	E	D	I	Y	E	K	E	I	V	K	S	R	F	A	I	R	K	I	X	L	L	E	F	S	Q	Y	L	E	N	Y	L	W	X	N	Y	S	P	E	V	S	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T		S	S		S																	T	T	T	T	T	T	S											T	T					T	T	G	G	G			T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	Y	L	X	S	I	C	C	X	V	N	E	K	F	R	E	N	V	P	A	W	E	I	F	K	K	K	P	D	H	F	P	F	F	F	K	H	I	L	K	A	A	L	A	E	T	D	G	E	F	S	L	H	E	Q	T	V	L	L	L	F	L	D	H	C	F	N	S	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	S			S						S		T	T														S		T	T	S	S	S																	T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	D	L	I	R	S	Q	V	Q	Q	L	I	S	L	P	X	W	X	G	L	Q	L	A	R	L	E	L	E	L	K	K	T	P	K	L	R	K	F	W	N	L	I	K	K	N	D	E	K	X	D	P	E	A	R	E	Q	A	Y	Q	E	R	R	F	L	S	Q	L	I	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												S	G	G	G	G	G	G	S												S	T	T														T	S													T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	F	I	S	V	L	K	S	V	P	L	S	E	P	V	T	X	D	K	V	H	Y	C	E	R	F	I	E	L	X	I	D	L	E	A	L	L	P	T	R	R	W	F	N	T	I	L	D	D	S	H	L	L	V	H	C	Y	L	S	N	L	V	R	R	E	E	D	G	H	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S		S	S	S																						T	S														T	T							T	S						T	T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	S	Q	L	L	D	X	L	K	F	Y	T	G	F	E	I	N	D	Q	T	G	N	A	L	T	E	N	E	X	T	T	I	H	Y	D	R	I	T	S	L	Q	R	A	A	F	A	H	F	P	E	L	Y	D	F	A	L	S	N	V	A	E	V	D	T	R	E	S	L	V	K	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T		S	B		T	T	T			B																										G	G	G						S							S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	F	G	P	L	S	S	N	T	L	H	Q	V	A	S	Y	L	C	L	L	P	T	L	P	K	N	E	D	T	T	F	D	K	E	F	L	L	E	L	L	V	S	R	H	E	R	R	I	S	Q	I	Q	Q	L	N	Q	X	P	L	Y	P	T	E	K	I	I	W	D	E	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S												T	T	S	S					T	T				S	S														S											T			S	S							T		T	T	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	V	P	T	E	Y	Y	S	G	E	G	C	L	A	L	P	K	L	N	L	Q	F	L	T	L	H	D	Y	L	L	R	N	F	N	L	F	R	L	E	S	T	Y	E	I	R	Q	D	I	E	D	S	V	S	R	X	K	P	W	Q	S	E	Y	G	G	V	V	F	G	G	W	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S			T	T			S	S	S			S					S	S			S	S																															T						T	T	S					S	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	R	X	A	Q	P	I	V	A	F	T	V	V	E	V	A	K	P	N	I	G	E	N	W	P	T	R	V	R	A	D	V	T	I	N	L	N	V	R	D	H	I	K	D	E	W	E	G	L	R	K	H	D	V	C	F	L	I	T	V	R	P	T	K	P	Y	G	T	K	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																	S	S			S		S												S									T	T			T	T												S		T	T
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	R	R	R	P	F	I	E	Q	V	G	L	V	Y	V	R	G	C	E	I	Q	G	X	L	D	D	K	G	R	V	I	E	P	R	P	N	L	R	G	E	S	R	T	F	R	V	F	L	D	P	N	Q	Y	Q	Q	D	X	T	N	T	I	Q	N	G	A	E	D	V	Y	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S							T													B		T	T	S		B									S	S																												G	G	G
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	F	N	I	I	X	R	R	K	P	K	E	N	N	F	K	A	V	L	E	T	I	R	N	L	X	N	T	D	C	V	V	P	D	W	L	H	D	I	I	L	G	Y	G	D	P	S	S	A	H	Y	S	K	X	P	N	Q	I	A	T	L	D	F	N	D	T	F	L	S	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									G	G	G																S													T	T		S		T	T	T	T	S	G	G	G		T	T			S						T	S		S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	H	L	K	A	S	F	P	G	H	N	V	K	V	T	V	E	D	P	A	L	Q	I	P	P	F	R	I	T	F	P	V	E	A	K	T	L	I	V	E	P	H	V	I	P	N	R	G	P	Y	P	Y	N	Q	P	K	R	N	T	I	Q	F	T	H	T	Q	I	E	A	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S					S				T	T	T			S	S										S														S		G	G	G	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	A	G	X	Q	P	G	L	T	X	V	V	G	P	P	G	T	G	K	T	D	V	A	V	Q	I	I	S	N	I	Y	H	N	F	P	E	Q	R	T	L	I	V	T	H	S	N	Q	A	L	N	Q	L	F	E	K	I	X	A	L	D	I	D	E	R	H	L	L	R	L	G	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S									T	T	S																		T	T								S													T	T	S	S			G	G	G						S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	G	E	E	E	L	E	T	E	K	D	F	S	R	Y	G	R	V	N	Y	V	L	A	R	R	I	E	L	L	E	E	V	K	R	L	Q	K	S	L	G	V	P	G	D	A	S	Y	T	C	E	T	A	G	Y	F	F	L	Y	Q	V	X	S	R	W	E	E	Y	I	S	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						S	S	S			S																										T	T					S														T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	K	N	P	D	V	T	E	V	S	T	F	F	P	F	H	E	Y	F	A	N	A	P	Q	P	I	F	K	G	R	S	Y	E	E	D	X	E	I	A	E	G	C	F	R	H	I	K	K	I	F	T	Q	L	E	E	F	R	A	S	E	L	L	R	S	G	L	D	R	S	K	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T		T	T	T	T	T	T	T	T	S	S	S		S			S	S																											T							S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	L	L	V	K	E	A	K	I	I	A	X	T	C	T	H	A	A	L	K	R	H	D	L	V	K	L	G	F	K	Y	D	N	I	L	X	E	E	A	A	Q	I	L	E	I	E	T	F	I	P	L	L	L	Q	N	P	Q	D	G	F	S	R	L	K	R	W	I	X	I	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T		S																				T				S					S	S	G	G	G	S	B						G	G	G	G	S	S			B	T	T	B
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	H	H	Q	L	P	P	V	I	K	N	X	A	F	Q	K	Y	S	N	X	E	Q	S	L	F	T	R	F	V	R	V	G	V	P	T	V	D	L	D	A	Q	G	R	A	R	A	S	L	C	N	L	Y	N	W	R	Y	K	N	L	G	N	L	P	H	V	Q	L	L	P	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S						S	S	T								T	T		B									T											S	S										T	T	S	S	S											G	G	G
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	S	T	A	N	A	G	L	L	Y	D	F	Q	L	I	N	V	E	D	F	Q	G	V	G	E	S	E	P	N	P	Y	F	Y	Q	N	L	G	E	A	E	Y	V	V	A	L	F	X	Y	X	C	L	L	G	Y	P	A	D	K	I	S	I	L	T	T	Y	N	G	Q	K	H	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	B			T	T	B	S	S	S									B	T	T	B	S	S	B		S	S	T	T			B																			T			G	G	G						S
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	I	R	D	I	I	N	R	R	C	G	N	N	P	L	I	G	R	P	N	K	V	T	T	V	D	R	F	Q	G	Q	Q	N	D	Y	I	L	L	S	L	V	R	T	R	A	V	G	H	L	R	D	V	R	R	L	V	V	A	X	S	R	A	R	L	G	L	Y	I	F	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	S	S		T	T					S					G	G	G	G	T	T													S	S			G	G	G	G	S								T	T	S
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	V	S	L	F	Q	N	C	F	E	L	T	P	A	F	S	Q	L	T	A	R	P	L	H	L	H	I	I	P	T	E	P	F	P	T	T	R	K	N	G	E	R	P	S	H	E	V	Q	I	I	K	N	X	P	Q	X	A	N	F	V	Y	N	X	Y	X	H	L	I	Q	T	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T		G	G	G								T	T	S		S	S					T	T			S	S				B	S	S	S			S	S							S
	.	.	.	.	.
Sequence	H	H	Y	H	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)