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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4phtC_

Fold library idPDB HeaderMoleculeTitle
c4phtC_PDB header: protein transportChain: C: PDB Molecule: general secretory pathway protein e;PDBTitle: atpase gspe in complex with the cytoplasmic domain of gspl from the2 vibrio vulnificus type ii secretion system


Added to library: Sat Nov 29 08:30:55 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RRLPFSFANRFKMVLEVPPVLYYVEPLNAQALVEVRRVLKQTFVPQAIAAEAFEKKLTEAYQDFFSLAEE
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T



SS


S






 .........80.........90.........100.........110.........120.........130.........140
Sequence APIIKLINAMLGEAIKEGASDIHIETFEKILSIRFRVDGVLRDVLSPSRKLAPLLVSRVKVMAKLDIAEK
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Known secondary structure (DSSP)
T
S
SS
TT


GGGTT

SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence RVPQDGRISLAVDVRVSTMPSSHGERVVMRLLDKNATRLDLHSLGMTPVNHDNFRHLISRPHGIILVTGP
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Known secondary structure (DSSP) SS




TTS
S
TT


T

TSSS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence TGSGKSTTLYAGLQELNSNERNILTVEDPIEFDIDGIGQTQVNPKVDMTFARGLRAILRQDPDVVMVGEI
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Known secondary structure (DSSP) TTSS

TTS
SS

S

TTS
BTTTTB
TT

SS

 .........290.........300.........310.........320.........330.........340.........350
Sequence RDLETAQIAVQASLTGHLVMSTLHTNTAVGAITRLRDMGIEPFLISSSLLGVLAQRLVRTLCQDCKEPYE
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Known secondary structure (DSSP)
STT


SST


TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ADKEQRKLFDALTLYRAKGCEKCNHKGYRGRTGIHELLMVDDKVQELIHAEAGEQAMDKYIREHTPSIRS
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Known secondary structure (DSSP)

TT







TTTSSSS

T
S

 .........430.........440.
Sequence DGLDKVLQGVTSLEEVMRVTK
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Known secondary structure (DSSP) TSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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