PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4phbA_

Fold library id	PDB Header	Molecule	Title
c4phbA_	PDB header: unknown function	Chain: A: PDB Molecule: uncharacterized protein;	PDBTitle: structure of the polysaccharide lyase-like protein cthe_2159 from c.2 thermocellum, gadolinium derivative

Links to external resources
Added to library: Sat Aug 30 08:17:50 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V N A K I V F D N D K V N A D N V D G L S V S E R E V K I T K P G M Y T F S G T W N D G Q I L V D I G K E F E A V L V L D G V N I T N T K S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T
S S
S S S S
T T
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A P I Y I K S A E K V K I E L A D G K D N V L T D A E F Y E F E D P Q D N K P N A C I Y S R D D I T I K G N G N L T V N A N F N N G I G T S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
T T
S S
S S T T
S S S S
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N D L K I T G G N I T V K A F N N G L K G N G S V T I S G G N I D I T A G A D G I K V E N T E E P H K G Y V N I T G G T I K I R A K D D A I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
S S
S S S
S
S S
S
S S T T
S
S S S S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . .

Sequence D S V R S V S I N N A D V K V S V G G K D V K C E G V L N I A E G C L G K L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S S
S
S S
T T S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	N	A	K	I	V	F	D	N	D	K	V	N	A	D	N	V	D	G	L	S	V	S	E	R	E	V	K	I	T	K	P	G	M	Y	T	F	S	G	T	W	N	D	G	Q	I	L	V	D	I	G	K	E	F	E	A	V	L	V	L	D	G	V	N	I	T	N	T	K	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T								T	T					S	S						S	S										S	S									T	T															S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	P	I	Y	I	K	S	A	E	K	V	K	I	E	L	A	D	G	K	D	N	V	L	T	D	A	E	F	Y	E	F	E	D	P	Q	D	N	K	P	N	A	C	I	Y	S	R	D	D	I	T	I	K	G	N	G	N	L	T	V	N	A	N	F	N	N	G	I	G	T	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S							S								T	T									S	S				S	S	T	T											S	S							S	S								S	S						S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	D	L	K	I	T	G	G	N	I	T	V	K	A	F	N	N	G	L	K	G	N	G	S	V	T	I	S	G	G	N	I	D	I	T	A	G	A	D	G	I	K	V	E	N	T	E	E	P	H	K	G	Y	V	N	I	T	G	G	T	I	K	I	R	A	K	D	D	A	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						S								S	S		S				S	S						S								S	S		S							S	S	T	T		S						S	S							S	S		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Sequence	D	S	V	R	S	V	S	I	N	N	A	D	V	K	V	S	V	G	G	K	D	V	K	C	E	G	V	L	N	I	A	E	G	C	L	G	K	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S						S	S							S	S		S				S	S						T	T	S