PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c4ph6A_

Fold library id	PDB Header	Molecule	Title
c4ph6A_	PDB header: lyase	Chain: A: PDB Molecule: 3-dehydroquinate dehydratase;	PDBTitle: structure of 3-dehydroquinate dehydratase from enterococcus faecalis

Links to external resources
Added to library: Sat Sep 20 08:26:09 2014

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P V I V K N V R I G E G N P K I V V P I V A P T A E D I L A E A T A S Q T L D C D L V E W R L D Y Y E N V A D F S D V C N L S Q Q V M E R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S S S
S S T T S S
S G G G
T T T T
T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G Q K P L L L T F R T Q K E G G E M A F S E E N Y F A L Y H E L V K K G A L D L L D I E L F A N P L A A D T L I H E A K K A G I K I V L C N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G T
S S
S T T S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence H D F Q K T P S Q E E I V A R L R Q M Q M R Q A D I C K I A V M P Q D A T D V L T L L S A T N E M Y T H Y A S V P I V T M S M G Q L G M I S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T
S
S S T
S S
T T T T G G G

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240

Sequence R V T G Q L F G S A L T F G S L S V Q V L R N Y L K T F E Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G T
T B
T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	V	I	V	K	N	V	R	I	G	E	G	N	P	K	I	V	V	P	I	V	A	P	T	A	E	D	I	L	A	E	A	T	A	S	Q	T	L	D	C	D	L	V	E	W	R	L	D	Y	Y	E	N	V	A	D	F	S	D	V	C	N	L	S	Q	Q	V	M	E	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T				T	S	S	S										S	S												T	T	S	S		S						G	G	G		T	T	T	T															T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	Q	K	P	L	L	L	T	F	R	T	Q	K	E	G	G	E	M	A	F	S	E	E	N	Y	F	A	L	Y	H	E	L	V	K	K	G	A	L	D	L	L	D	I	E	L	F	A	N	P	L	A	A	D	T	L	I	H	E	A	K	K	A	G	I	K	I	V	L	C	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T										G	G	G	T		S	S																					S						T	T	S															T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	D	F	Q	K	T	P	S	Q	E	E	I	V	A	R	L	R	Q	M	Q	M	R	Q	A	D	I	C	K	I	A	V	M	P	Q	D	A	T	D	V	L	T	L	L	S	A	T	N	E	M	Y	T	H	Y	A	S	V	P	I	V	T	M	S	M	G	Q	L	G	M	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S																		T	T		S									S	S																		T		S	S								T	T	T	T	G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Sequence	R	V	T	G	Q	L	F	G	S	A	L	T	F	G	S	L	S	V	Q	V	L	R	N	Y	L	K	T	F	E	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	T						T	B																			T