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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4pfiA_

Fold library idPDB HeaderMoleculeTitle
c4pfiA_PDB header: transport proteinChain: A: PDB Molecule: trap dicarboxylate transporter-dctp subunit;PDBTitle: crystal structure of a trap periplasmic solute binding protein from2 marinobacter aquaeolei vt8 (maqu_2829, target efi-510133), apo open3 structure


Added to library: Sat May 17 08:22:16 2014
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VTWRFALEEIEGSVQHLYAQQFREQVEALSGGRIEVDVFPYGSLAQLTELTRNGSVNLAFASPGHLADTV
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Known secondary structure (DSSP)

SS
TTSTTSS
TT



TS
S
TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence PETGLFNLHFLLPEEQEPARRLLEAPAFISAFEPAYHNAGLQLLGFVPEGWXTWTANNPLRTPSDFQGLR
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Known secondary structure (DSSP) GGGGGGGSTT
S
SS
TTT
SS


SGGGGTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FRTXTSETAAEAFRSYGADPVQTPFAQVYSDLQLGNIDGQSNPVFAIEEXGFHEVQNVLTXARASRFIAS
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Known secondary structure (DSSP)

SSTTT



TSS

TGGGG
S



 .........220.........230.........240.........250.........260.........270.........280
Sequence VVANEDWFAGLPSQERKWLEETIAQLSEEAWTLQEDLNKERLETILEQGGIRVVRLTEDERAAFRDASLP
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Known secondary structure (DSSP) SS
TT
S


T
 .........290.........300..
Sequence ARQRFIELTGEKGQALIQRATS
Predicted secondary structure


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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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