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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c4pfeB_

Fold library idPDB HeaderMoleculeTitle
c4pfeB_PDB header: fluorescent proteinChain: B: PDB Molecule: green fluorescent protein;PDBTitle: crystal structure of vsfgfp-0


Added to library: Sat Jun 27 08:18:20 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KGEELFTGVVPILVELDGDVNGHKFSVRGEGEGDATNGKLTLKFICTTGKLPVPWPTLVTTLVQCFSRYP
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Known secondary structure (DSSP)
GGGGGSS
TTTTTTTTSS
SS
GGGGTTT

GGGSB

 .........80.........90.........100.........110.........120.........130.........140
Sequence DHMKRHDFFKSAMPEGYVQERTISFKDDGTYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNF
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Known secondary structure (DSSP) GGGGGG

TGGGTTT
TTS
TTS

TTSTTTTT
B
S

 .........150.........160.........170.........180.........190.........200.........210
Sequence NSHNVYITADKQKNGIKANFKIRHNVEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSVLSKDPNEKR
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Known secondary structure (DSSP)
TTTTBTTS
SSSS





S

TT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence DHMVLLEFVTAAGIAQVQLVESGGALVQPGGSLRLSCAASGFPVNRYSMRWYRQAPGKEREWVAGMSSAG
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Known secondary structure (DSSP) S


SS



TT

SS
GGGS

TTS


SSS
 .........290.........300.........310.........320.........330.........340
Sequence DRSSYEDSVKGRFTISRDDARNTVYLQMNSLKPEDTAVYYCNVNVGFEYWGQGTQVTVSH
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Known secondary structure (DSSP) S

GGGTTTTTTT
S

GGG
SSSB




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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